iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093929

Ensembl Protein ID

ENSPSIP00000016596.1

UniProt Accession

K7G8I5; K7G8I5_PELSI

Genbank Protein ID

ENSPSIP00000016596

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01164075

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000014750.1	ENSPSIT00000016672.1	ENSPSIP00000016596.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	34.6	139	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 139  CPICMDGYseivqsGRLIVSTKCGHVFCSQCL------RDSLRNANSCPTCR 184
           ********44444433255688*********9......4559*********8 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSTTQRKRRG RAINSRQTQK RNRLVASVTE MASEAEPIEL EESAGEEVVD LTCESSEPVV 60
VDLTHNDSVV IVEENQRQRR NLGLRSQRQS DSCILSSDDE DESRDNDVYV TNKVSGDLET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCACAG TAAGTATTTT TTAATGAAAT AACTGTGTAA CTGGTTATCT AGTCCATTAT 60
TATTTTTAGA CTTATGGCCA TTTTAGACTT GCACCATTTG AAAACATAAT GGGTGTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	40.98	1.00e-11	62.80
IUUC-Aml-002206	Ailuropoda melanoleuca	70.98	2.00e-65	241.00
IUUC-Atr-002771	Amborella trichopoda	35.38	6.00e-10	57.40
IUUC-Apl-004120	Anas platyrhynchos	88.83	4.00e-90	323.00
IUUC-Aca-004236	Anolis carolinensis	70.92	6.00e-73	266.00
IUUC-Ame-011555	Astyanax mexicanus	56.88	1.00e-43	168.00
IUUC-Bta-012913	Bos taurus	67.51	9.00e-68	248.00
IUUC-Bdi-014655	Brachypodium distachyon	44.26	2.00e-11	62.80
IUUC-Bol-016418	Brassica oleracea	39.34	8.00e-10	57.40
IUUC-Bra-016890	Brassica rapa	38.60	1.00e-08	52.80
IUUC-Cja-019151	Callithrix jacchus	69.70	2.00e-62	231.00
IUUC-Cfa-020868	Canis familiaris	68.37	7.00e-62	229.00
IUUC-Cpo-022249	Cavia porcellus	68.91	1.00e-59	221.00
IUUC-Csa-024125	Chlorocebus sabaeus	71.07	2.00e-66	244.00
IUUC-Cin-025749	Ciona intestinalis	44.26	7.00e-15	73.60
IUUC-Csv-026318	Ciona savignyi	41.79	1.00e-14	72.40
IUUC-Dre-028145	Danio rerio	50.00	6.00e-38	149.00
IUUC-Dno-029605	Dasypus novemcinctus	69.54	3.00e-69	253.00
IUUC-Dor-030898	Dipodomys ordii	64.97	2.00e-64	238.00
IUUC-Dme-032177	Drosophila melanogaster	49.15	6.00e-13	67.80
IUUC-Ete-032694	Echinops telfairi	67.19	7.00e-56	209.00
IUUC-Eca-033443	Equus caballus	70.56	4.00e-65	239.00
IUUC-Eeu-034603	Erinaceus europaeus	70.37	1.00e-40	157.00
IUUC-Fca-035507	Felis catus	69.79	5.00e-61	226.00
IUUC-Fal-037382	Ficedula albicollis	86.29	9.00e-80	288.00
IUUC-Gmo-038960	Gadus morhua	42.48	1.00e-21	94.40
IUUC-Gga-040493	Gallus gallus	83.25	4.00e-86	309.00
IUUC-Gac-042194	Gasterosteus aculeatus	51.63	1.00e-38	152.00
IUUC-Gma-042666	Glycine max	37.70	8.00e-09	53.10
IUUC-Ggo-044726	Gorilla gorilla	70.05	3.00e-64	237.00
IUUC-Hsa-046212	Homo sapiens	70.05	3.00e-64	237.00
IUUC-Hvu-047337	Hordeum vulgare	39.34	7.00e-12	63.90
IUUC-Itr-047892	Ictidomys tridecemlineatus	69.43	4.00e-64	236.00
IUUC-Lpe-050920	Leersia perrieri	39.34	4.00e-11	61.20
IUUC-Loc-051907	Lepisosteus oculatus	51.48	2.00e-39	154.00
IUUC-Laf-054145	Loxodonta africana	67.88	5.00e-61	226.00
IUUC-Mcc-055689	Macaca mulatta	70.56	1.00e-64	238.00
IUUC-Meu-056654	Macropus eugenii	92.19	2.00e-33	134.00
IUUC-Mtr-058314	Medicago truncatula	44.23	5.00e-11	60.10
IUUC-Mga-059303	Meleagris gallopavo	86.80	6.00e-89	319.00
IUUC-Mmr-061355	Microcebus murinus	69.04	9.00e-64	235.00
IUUC-Mdo-062968	Monodelphis domestica	72.16	4.00e-73	266.00
IUUC-Mmu-064421	Mus musculus	68.91	9.00e-71	258.00
IUUC-Mac-064573	Musa acuminata	33.77	5.00e-12	64.70
IUUC-Mpu-066522	Mustela putorius furo	70.98	1.00e-65	241.00
IUUC-Mlu-067065	Myotis lucifugus	69.95	8.00e-64	235.00
IUUC-Nle-069198	Nomascus leucogenys	68.53	1.00e-62	232.00
IUUC-Opr-071141	Ochotona princeps	67.71	1.00e-66	244.00
IUUC-Oan-073341	Ornithorhynchus anatinus	72.19	5.00e-44	169.00
IUUC-Ocu-073787	Oryctolagus cuniculus	70.10	4.00e-72	263.00
IUUC-Oba-075460	Oryza barthii	41.94	8.00e-12	63.50
IUUC-Obr-076349	Oryza brachyantha	39.34	9.00e-11	60.50
IUUC-Ogl-077094	Oryza glaberrima	41.94	8.00e-12	63.50
IUUC-Ogu-078677	Oryza glumaepatula	41.94	7.00e-12	63.90
IUUC-Oin-079992	Oryza indica	41.94	8.00e-12	63.50
IUUC-Olo-080257	Oryza longistaminata	43.55	5.00e-12	64.30
IUUC-Ome-081943	Oryza meridionalis	41.94	8.00e-12	63.90
IUUC-Oni-082671	Oryza nivara	41.94	8.00e-12	63.50
IUUC-Opu-083644	Oryza punctata	41.94	1.00e-11	63.50
IUUC-Oru-084650	Oryza rufipogon	41.94	8.00e-12	63.50
IUUC-Osa-086110	Oryza sativa	41.94	8.00e-12	63.50
IUUC-Ola-086970	Oryzias latipes	43.40	1.00e-35	142.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	8.00e-11	59.30
IUUC-Oga-088242	Otolemur garnettii	68.91	1.00e-70	258.00
IUUC-Oar-089469	Ovis aries	69.95	6.00e-72	262.00
IUUC-Ptr-091254	Pan troglodytes	67.01	7.00e-59	219.00
IUUC-Pan-092919	Papio anubis	71.13	1.00e-65	241.00
IUUC-Pma-094118	Petromyzon marinus	58.46	1.00e-21	94.00
IUUC-Ppa-095567	Physcomitrella patens	44.26	1.00e-11	62.80
IUUC-Pfo-097412	Poecilia formosa	49.10	6.00e-36	142.00
IUUC-Pab-098424	Pongo abelii	70.05	3.00e-64	237.00
IUUC-Pop-099483	Populus trichocarpa	37.10	1.00e-09	56.20
IUUC-Pca-100463	Procavia capensis	62.84	1.00e-32	132.00
IUUC-Ppe-101755	Prunus persica	40.32	2.00e-10	57.80
IUUC-Pva-102594	Pteropus vampyrus	62.84	5.00e-40	156.00
IUUC-Rno-105460	Rattus norvegicus	67.69	5.00e-62	229.00
IUUC-Sha-107487	Sarcophilus harrisii	77.32	3.00e-75	273.00
IUUC-Smo-108908	Selaginella moellendorffii	37.10	4.00e-08	51.20
IUUC-Sit-109959	Setaria italica	37.70	2.00e-05	42.70
IUUC-Stu-112694	Solanum tuberosum	42.19	1.00e-10	59.70
IUUC-Sar-113601	Sorex araneus	69.79	7.00e-63	232.00
IUUC-Sbi-114398	Sorghum bicolor	39.34	1.00e-05	43.10
IUUC-Ssc-115911	Sus scrofa	71.07	2.00e-65	241.00
IUUC-Tgu-117264	Taeniopygia guttata	83.51	6.00e-75	272.00
IUUC-Tru-117663	Takifugu rubripes	54.22	4.00e-42	163.00
IUUC-Tsy-118883	Tarsius syrichta	65.36	2.00e-50	190.00
IUUC-Tae-124872	Triticum aestivum	41.67	1.00e-11	63.20
IUUC-Tur-126408	Triticum urartu	40.98	1.00e-11	63.20
IUUC-Ttr-128950	Tursiops truncatus	90.77	1.00e-34	139.00
IUUC-Vvi-130833	Vitis vinifera	33.64	1.00e-11	62.80
IUUC-Xtr-132879	Xenopus tropicalis	66.04	6.00e-49	186.00
IUUC-Xma-133319	Xiphophorus maculatus	50.33	1.00e-34	137.00
IUUC-Zma-135930	Zea mays	42.62	3.00e-06	45.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence