iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113937

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G280900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031740	Sb04g031740.1	Sb04g031740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-08	35.1	112	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle +   ++ ++ +++C H+fh+ C+ +w        ++++CPlCr
   Q: 112  CIVCLETLeatDE-VRrLGNCAHAFHRACIDRW-----IDLGRATCPLCR 155
           ******9988444.661566*************.....577899*****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGFPLVCYCL PIPKPIIVFC RVLSTIRDAV LLMLAVVGLC RFPHVDAAAR GRGTADAAHH 60
QPEEVKSRLP AVEYAQLLAE QQQPALSSSA GAHTACQQCR DHEGGGEDAP ACIVCLETLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTTCC CGCTGGTGTG CTACTGCCTC CCGATCCCGA AGCCGATCAT CGTCTTCTGC 60
AGGGTGCTCA GCACCATCAG GGACGCCGTC CTGCTGATGC TCGCCGTCGT GGGACTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g031740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014236	Brachypodium distachyon	54.72	4.00e-40	156.00
IUUC-Hvu-047465	Hordeum vulgare	56.52	8.00e-44	168.00
IUUC-Lpe-051652	Leersia perrieri	54.04	7.00e-39	152.00
IUUC-Lma-052952	Leptosphaeria maculans	54.35	8.00e-11	61.60
IUUC-Oba-075396	Oryza barthii	55.13	6.00e-32	129.00
IUUC-Ogu-078594	Oryza glumaepatula	55.77	2.00e-32	130.00
IUUC-Oin-080064	Oryza indica	55.77	1.00e-32	130.00
IUUC-Oni-082659	Oryza nivara	55.77	1.00e-32	130.00
IUUC-Opu-083536	Oryza punctata	54.78	1.00e-37	147.00
IUUC-Oru-084852	Oryza rufipogon	55.77	2.00e-32	130.00
IUUC-Osa-085684	Oryza sativa	55.77	2.00e-32	130.00
IUUC-Pte-104131	Pyrenophora teres	52.17	1.00e-10	60.80
IUUC-Pyt-104807	Pyrenophora triticirepentis	52.17	1.00e-10	60.50
IUUC-Spo-108030	Schizosaccharomyces pombe	53.33	2.00e-12	66.60
IUUC-Sit-110324	Setaria italica	64.42	6.00e-52	195.00
IUUC-Tae-123459	Triticum aestivum	58.64	9.00e-37	144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence