iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113872

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G192400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g024040	Sb04g024040.1	Sb04g024040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	1.10e-07	32.8	54	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 67   saaakpkaglrseaaaapapapaptptpeegpdag..lldrlpeeilveilklldkeellraarvcrrwqelasqkalwktv 146
           s++  p a l  + a    pap p p pe g  ++   + +l e++++e+l++ ++++l +aa+v+r w+ la++++lw+++
   Q: 54   SSTQAPLAPLLPQEARVGDPAPPPPPGPESGGGEQvmRVPDLGEDLVFEVLMRAEARTLAAAACVSRGWRVLARDERLWEAA 135
           4455688888888888899999999999987655500566899***************************99999****976 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKCRSDSSGG GDDPRPPPPA ATGVGGSPSG EPSKKQRTEE PPPGSSVAGE CSSSSTQAPL 60
APLLPQEARV GDPAPPPPPG PESGGGEQVM RVPDLGEDLV FEVLMRAEAR TLAAAACVSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTGCC GCTCCGATTC GTCAGGCGGT GGCGACGACC CCCGGCCCCC GCCGCCCGCT 60
GCCACGGGCG TTGGCGGCTC GCCCTCGGGC GAGCCGAGTA AGAAGCAGCG GACGGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF00646--F-box

KEGG

sbi:SORBI_04g024040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	43.65	2.00e-18	84.30
IUUC-Aly-006435	Arabidopsis lyrata	44.17	3.00e-23	99.80
IUUC-Ath-007482	Arabidopsis thaliana	41.73	5.00e-23	99.00
IUUC-Bdi-014906	Brachypodium distachyon	57.87	4.00e-45	173.00
IUUC-Bol-016273	Brassica oleracea	51.25	3.00e-18	83.20
IUUC-Bra-016627	Brassica rapa	43.40	2.00e-18	83.60
IUUC-Gma-043301	Glycine max	43.28	6.00e-24	102.00
IUUC-Hvu-047070	Hordeum vulgare	69.60	5.00e-31	126.00
IUUC-Mtr-057791	Medicago truncatula	42.86	4.00e-24	103.00
IUUC-Mac-064781	Musa acuminata	56.59	1.00e-27	114.00
IUUC-Obr-076578	Oryza brachyantha	75.68	2.00e-47	181.00
IUUC-Ogl-077389	Oryza glaberrima	75.00	1.00e-31	128.00
IUUC-Oin-079212	Oryza indica	75.00	1.00e-31	128.00
IUUC-Pop-098990	Populus trichocarpa	41.22	7.00e-21	92.40
IUUC-Ppe-102068	Prunus persica	40.00	6.00e-20	89.40
IUUC-Smo-108701	Selaginella moellendorffii	39.32	1.00e-12	65.50
IUUC-Sit-110635	Setaria italica	83.95	3.00e-30	124.00
IUUC-Sly-111686	Solanum lycopersicum	35.96	2.00e-09	54.70
IUUC-Stu-111934	Solanum tuberosum	37.41	5.00e-09	53.10
IUUC-Tca-121336	Theobroma cacao	46.77	1.00e-24	104.00
IUUC-Vvi-131285	Vitis vinifera	41.61	4.00e-21	93.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence