iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__1333__AT3G49810.1	fgenesh2_kg.5__1333__AT3G49810.1	fgenesh2_kg.5__1333__AT3G49810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.30e-29	100.2	60	131

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++p+ f+CpIsle+M+dPv+l++G+ty+r +I+kw++ g+ tcP+t+q+l +++++Pn+tl++li  w +++
   Q: 60   DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLHHLIYTWFSQK 131
           69******************************************************************9987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPMFQPLKRD GLIGFEGGGD GQVLDLDTAV KDGVLGGVNG GVVDEKLDLK KMIKELDLQD 60
IPSVFICPIS LEPMQDPVTL CTGQTYERLN IHKWFNLGHL TCPTTMQELW DDTVTPNKTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAACAAAAG AGAGAGTACG GGTTTCTTCG TCATTCTCAC GAATTCGTGA ATTTTTTTTT 60
GTTTTCGTCA TCTGGGTTTT CTCAAATTCT CTTCCTTTTT ATCTTCTGAG ATTATCTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_485341

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	59.02	6.00e-142	496.00
IUUC-Atr-002608	Amborella trichopoda	65.77	2.00e-149	521.00
IUUC-Ath-007399	Arabidopsis thaliana	97.54	0.00e+00	779.00
IUUC-Bdi-014966	Brachypodium distachyon	59.02	2.00e-145	508.00
IUUC-Bol-015410	Brassica oleracea	93.29	0.00e+00	738.00
IUUC-Bra-017594	Brassica rapa	94.42	0.00e+00	709.00
IUUC-Gma-043270	Glycine max	73.94	0.00e+00	656.00
IUUC-Hvu-047172	Hordeum vulgare	59.56	2.00e-138	484.00
IUUC-Lpe-050937	Leersia perrieri	57.11	3.00e-126	444.00
IUUC-Mtr-058060	Medicago truncatula	73.84	0.00e+00	650.00
IUUC-Mac-065362	Musa acuminata	64.13	2.00e-149	521.00
IUUC-Oba-075363	Oryza barthii	54.57	8.00e-101	359.00
IUUC-Obr-076221	Oryza brachyantha	59.24	7.00e-135	473.00
IUUC-Ogl-077601	Oryza glaberrima	59.69	2.00e-121	428.00
IUUC-Ogu-078802	Oryza glumaepatula	59.47	2.00e-130	458.00
IUUC-Oin-079670	Oryza indica	59.47	3.00e-121	427.00
IUUC-Olo-080252	Oryza longistaminata	63.37	2.00e-78	285.00
IUUC-Ome-081565	Oryza meridionalis	59.47	3.00e-121	427.00
IUUC-Oni-082638	Oryza nivara	59.47	3.00e-121	427.00
IUUC-Opu-083387	Oryza punctata	59.47	1.00e-121	429.00
IUUC-Oru-084585	Oryza rufipogon	59.47	3.00e-121	427.00
IUUC-Osa-086056	Oryza sativa	59.47	3.00e-121	427.00
IUUC-Pop-098956	Populus trichocarpa	68.08	3.00e-157	547.00
IUUC-Ppe-101617	Prunus persica	75.50	0.00e+00	626.00
IUUC-Sit-109761	Setaria italica	59.91	6.00e-135	473.00
IUUC-Sly-111041	Solanum lycopersicum	60.00	4.00e-140	490.00
IUUC-Stu-112727	Solanum tuberosum	65.11	3.00e-167	580.00
IUUC-Sbi-113971	Sorghum bicolor	60.13	3.00e-142	497.00
IUUC-Tca-121202	Theobroma cacao	76.94	0.00e+00	688.00
IUUC-Tae-123424	Triticum aestivum	59.02	7.00e-142	496.00
IUUC-Tur-126157	Triticum urartu	64.13	2.00e-60	225.00
IUUC-Vvi-131367	Vitis vinifera	77.01	0.00e+00	644.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence