iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017927

Ensembl Protein ID

Bra029250.1-P

UniProt Accession

M4EKD3; M4EKD3_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra029250	Bra029250.1	Bra029250.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.70e-19	68.4	32	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+eflCpI++ lM+dPvv+psG+t++r s++ + + g   + +++++ + + ++Pnl+++++i +wc+++++
   Q: 32   TPPEFLCPITGFLMSDPVVVPSGQTFERLSVQICRNLGFVPDLLDGTRPDFSAVIPNLAMKSTIFSWCDRKKI 104
           79*******************************************************************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGGNNRQRWF SFHQRSASAT ATTVPQHKHD ETPPEFLCPI TGFLMSDPVV VPSGQTFERL 60
SVQICRNLGF VPDLLDGTRP DFSAVIPNLA MKSTIFSWCD RKKIDHPRPP DAAYVENVVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGGAA ACAACAGGCA GAGATGGTTC TCCTTCCACC AACGCTCCGC CTCCGCCACC 60
GCCACAACCG TGCCGCAACA CAAACACGAC GAGACTCCCC CGGAGTTCCT CTGCCCCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013555	Bos taurus	28.83	2.00e-07	52.00
IUUC-Bol-015508	Brassica oleracea	96.59	0.00e+00	956.00
IUUC-Gac-041812	Gasterosteus aculeatus	28.34	5.00e-09	57.00
IUUC-Ggo-045030	Gorilla gorilla	28.83	2.00e-07	51.60
IUUC-Meu-056121	Macropus eugenii	32.31	2.00e-07	52.00
IUUC-Mmr-061778	Microcebus murinus	33.88	3.00e-11	62.40
IUUC-Mac-064827	Musa acuminata	45.36	2.00e-51	196.00
IUUC-Mlu-067208	Myotis lucifugus	28.83	2.00e-07	52.00
IUUC-Oba-075532	Oryza barthii	49.42	4.00e-35	142.00
IUUC-Ogl-077033	Oryza glaberrima	43.64	5.00e-39	155.00
IUUC-Ogu-078087	Oryza glumaepatula	43.64	1.00e-38	154.00
IUUC-Oin-079818	Oryza indica	41.94	5.00e-35	141.00
IUUC-Olo-080764	Oryza longistaminata	44.09	5.00e-34	137.00
IUUC-Ome-081313	Oryza meridionalis	43.99	1.00e-39	157.00
IUUC-Oni-082747	Oryza nivara	44.33	4.00e-40	159.00
IUUC-Opu-084021	Oryza punctata	45.89	7.00e-45	174.00
IUUC-Oru-084445	Oryza rufipogon	44.33	1.00e-39	158.00
IUUC-Osa-085410	Oryza sativa	44.33	3.00e-40	159.00
IUUC-Oga-088587	Otolemur garnettii	28.83	8.00e-08	52.80
IUUC-Sha-107173	Sarcophilus harrisii	30.49	2.00e-07	51.60
IUUC-Sar-113307	Sorex araneus	30.71	2.00e-07	51.20
IUUC-Tru-118154	Takifugu rubripes	27.81	5.00e-08	53.50
IUUC-Tni-120112	Tetraodon nigroviridis	28.16	8.00e-08	53.10
IUUC-Vpa-130794	Vicugna pacos	29.01	2.00e-07	52.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence