iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048876

Ensembl Protein ID

ENSSTOP00000021741.1

UniProt Accession

I3NBJ4; I3NBJ4_ICTTR

Genbank Protein ID

ENSSTOP00000021741

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01057431

Gene Name

Pdlim2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000024161.1	ENSSTOT00000019897.1	ENSSTOP00000021741.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	84.27	3.00e-129	459.00	IUUC-Hsa-045868
E3 activity/Other	79.78	5.00e-124	441.00	IUUC-Mmu-063244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MALTVDVLGP APWGFRITGG RDFHTPIRVT KVTERGKAEA ADLRPGDIIL AINGESAEGM 60
LHAEAQSKIR QSASPLRLQL DRSGAASPGQ TNGEGSLEVL ATRFQGSLRT HLDSQSSLRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACTGA CAGTGGATGT GCTGGGGCCA GCACCCTGGG GCTTCCGCAT CACCGGGGGC 60
AGGGATTTCC ACACGCCCAT CAGGGTGACC AAGGTAAGGA CTGGTTTGGG GAGATAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR031847--DUF4749
IPR001478--PDZ
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50106--PDZ

Pfam

PF15936--DUF4749
PF00412--LIM
PF00595--PDZ

SMART

SM00132--LIM
SM00228--PDZ

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001484	Ailuropoda melanoleuca	81.48	2.00e-136	478.00
IUUC-Aca-004512	Anolis carolinensis	55.49	3.00e-92	331.00
IUUC-Ame-011626	Astyanax mexicanus	51.97	3.00e-32	132.00
IUUC-Bta-012510	Bos taurus	77.65	3.00e-131	461.00
IUUC-Cja-019248	Callithrix jacchus	78.93	8.00e-136	476.00
IUUC-Cfa-020352	Canis familiaris	81.18	1.00e-131	462.00
IUUC-Cpo-021995	Cavia porcellus	71.90	4.00e-118	417.00
IUUC-Csa-024190	Chlorocebus sabaeus	84.55	8.00e-132	462.00
IUUC-Dre-027418	Danio rerio	48.03	2.00e-27	116.00
IUUC-Dor-030439	Dipodomys ordii	70.03	5.00e-69	254.00
IUUC-Dme-031753	Drosophila melanogaster	44.12	4.00e-11	62.40
IUUC-Eca-034183	Equus caballus	81.74	4.00e-134	470.00
IUUC-Eeu-034958	Erinaceus europaeus	76.17	8.00e-92	329.00
IUUC-Fca-035680	Felis catus	83.99	7.00e-140	489.00
IUUC-Fal-037626	Ficedula albicollis	32.35	6.00e-07	49.30
IUUC-Gmo-038558	Gadus morhua	55.97	1.00e-41	163.00
IUUC-Gac-041738	Gasterosteus aculeatus	46.44	3.00e-77	281.00
IUUC-Ggo-044609	Gorilla gorilla	80.06	8.00e-131	459.00
IUUC-Hsa-045868	Homo sapiens	83.43	1.00e-128	453.00
IUUC-Loc-052212	Lepisosteus oculatus	50.97	9.00e-83	300.00
IUUC-Laf-053824	Loxodonta africana	84.27	1.00e-127	448.00
IUUC-Mcc-054962	Macaca mulatta	84.55	8.00e-132	462.00
IUUC-Meu-056007	Macropus eugenii	75.26	6.00e-40	158.00
IUUC-Mmr-060607	Microcebus murinus	84.55	1.00e-128	452.00
IUUC-Mdo-062935	Monodelphis domestica	71.85	5.00e-53	201.00
IUUC-Mmu-063244	Mus musculus	80.06	9.00e-136	476.00
IUUC-Mpu-065888	Mustela putorius furo	85.88	4.00e-129	454.00
IUUC-Mlu-067124	Myotis lucifugus	84.27	5.00e-147	513.00
IUUC-Ncr-068674	Neurospora crassa	38.60	3.00e-06	47.40
IUUC-Nle-069063	Nomascus leucogenys	81.54	1.00e-92	332.00
IUUC-Opr-071221	Ochotona princeps	75.35	3.00e-103	368.00
IUUC-Ont-072000	Oreochromis niloticus	46.15	5.00e-75	274.00
IUUC-Oan-073012	Ornithorhynchus anatinus	60.06	3.00e-84	305.00
IUUC-Ocu-074376	Oryctolagus cuniculus	79.49	4.00e-118	417.00
IUUC-Ogl-077035	Oryza glaberrima	24.84	1.60e-02	33.90
IUUC-Oin-079541	Oryza indica	24.84	1.50e-02	33.90
IUUC-Osa-085464	Oryza sativa	24.84	1.50e-02	33.90
IUUC-Ola-086915	Oryzias latipes	44.92	8.00e-73	266.00
IUUC-Oga-088393	Otolemur garnettii	84.31	5.00e-137	479.00
IUUC-Oar-089421	Ovis aries	77.93	1.00e-133	469.00
IUUC-Ptr-091089	Pan troglodytes	83.08	6.00e-116	410.00
IUUC-Pan-092163	Papio anubis	84.27	1.00e-123	436.00
IUUC-Psi-093043	Pelodiscus sinensis	46.78	2.00e-73	268.00
IUUC-Pfo-096885	Poecilia formosa	56.74	7.00e-43	167.00
IUUC-Pab-097988	Pongo abelii	83.08	1.00e-115	409.00
IUUC-Pca-100131	Procavia capensis	84.94	2.00e-125	442.00
IUUC-Ppe-101255	Prunus persica	32.35	5.60e-01	28.10
IUUC-Pva-102706	Pteropus vampyrus	74.93	5.00e-127	447.00
IUUC-Ptt-104003	Puccinia triticina	32.69	1.60e-01	30.80
IUUC-Pte-104256	Pyrenophora teres	35.00	3.00e-06	47.00
IUUC-Pyt-104720	Pyrenophora triticirepentis	35.00	8.00e-06	44.70
IUUC-Rno-104992	Rattus norvegicus	78.65	2.00e-135	474.00
IUUC-Sha-107463	Sarcophilus harrisii	65.33	2.00e-72	265.00
IUUC-Sar-113038	Sorex araneus	39.56	7.00e-17	82.40
IUUC-Sre-115199	Sporisorium reilianum	30.00	3.70e-01	30.40
IUUC-Ssc-115811	Sus scrofa	82.45	5.00e-132	463.00
IUUC-Tbe-127240	Tupaia belangeri	65.37	1.00e-71	262.00
IUUC-Ttr-128236	Tursiops truncatus	63.76	1.00e-94	339.00
IUUC-Vpa-130569	Vicugna pacos	75.43	1.00e-77	283.00
IUUC-Vvi-131569	Vitis vinifera	25.00	3.20e-01	29.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence