iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002687

Ensembl Protein ID

ERN17889

UniProt Accession

U5D614; U5D614_AMBTC

Genbank Protein ID

ERN17889.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392311

Gene Name

AMTR_s00047p00220400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00047p00220400	ERN17889	ERN17889

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-27	92.7	326	359
UBD/Beta-Prp	1.20e-54	186.0	129	402

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
            t+ +f  d ++++s++ D t+k+W++ +g+l+k
   Q: 326  ATSANFtKDqRYVLSCGKDSTVKLWEVGSGRLVK 359
           57889997779******************99987 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl................lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk. 91
           +hk+  +c  fspd++++atgs+d +ik++++++ k                 +r++++h ++v++++f+p++ +l++g++D+tik +d+s+    ++++ 
   Q: 129  EHKNAARCARFSPDGRFVATGSADTSIKLFEISKVKQmmmpdsnardgpvrpvIRTFYDHLQPVNDLDFHPQATVLISGAKDHTIKFFDFSKTAVKRAYRv 229
           68899999**************************8889*****************************************************9998888888 PP
   S: 92   .ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls. 187
            + +++v+s+sf+psg +l++G+++ +++++d++t qc+ +    + + +g++n v+++++g ++v++s+D+ vr+Wd  +++++r   g  ++sv+ +s 
   Q: 230  iQDTHNVRSVSFHPSGLFLLAGTDHHIAHLYDINTFQCYLSakvQDININGAINQVRYSSNGGMYVTASKDGSVRVWDGGSAQCVRSIIG-AHGSVEATSa 329
           899*************************************999777789****************************************9.6666665555 PP
   S: 188  .fdsngkelvsgsldgtvklwdlqtgecvrtlng..htdnvksvrfspnderlvsgssDgsiriWdlrsgdllkt 259
            f++++++++s+++d+tvklw++ +g+ v++++g  ht+  ++v + +n++  ++      +++   r+++++ +
   Q: 330  nFTKDQRYVLSCGKDSTVKLWEVGSGRLVKQYIGaiHTQLRCQVVLKSNTKSNICIV-SVLVKVS-FRTRKFWLS 402
           6*********************************99999999999997776655543.2444443.555555554 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDISLEQTLQ DGKLLRQVNA FIVSHLRDNN LNQAAIAVAS ATMTPLNVEV PSNKLVDLVS 60
KGLAVEREEA LRGVSPTSTV DPTGGGTVIS AGYGLVPTLP THSLDFSAVQ DSKGSSKSFP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACATAA GTTTGGAGCA GACTTTGCAG GATGGCAAGC TCCTCCGCCA AGTCAATGCA 60
TTTATTGTTT CACACTTGAG GGACAACAAC TTGAACCAGG TAAAGTCCCT AACTTTTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	38.16	7.00e-68	249.00
IUUC-Apl-003438	Anas platyrhynchos	38.16	5.00e-68	250.00
IUUC-Aca-005178	Anolis carolinensis	37.88	9.00e-68	249.00
IUUC-Aly-005791	Arabidopsis lyrata	55.60	9.00e-156	541.00
IUUC-Ath-006689	Arabidopsis thaliana	56.01	2.00e-153	534.00
IUUC-Ame-011217	Astyanax mexicanus	47.50	3.00e-53	200.00
IUUC-Bta-012619	Bos taurus	38.16	6.00e-68	249.00
IUUC-Bdi-014515	Brachypodium distachyon	55.42	3.00e-147	513.00
IUUC-Bra-017450	Brassica rapa	55.58	9.00e-144	502.00
IUUC-Cel-018151	Caenorhabditis elegans	37.93	2.00e-59	222.00
IUUC-Cja-019304	Callithrix jacchus	38.44	2.00e-68	251.00
IUUC-Cfa-020208	Canis familiaris	38.16	7.00e-68	249.00
IUUC-Cpo-022245	Cavia porcellus	38.16	7.00e-68	249.00
IUUC-Csa-023066	Chlorocebus sabaeus	38.44	2.00e-68	251.00
IUUC-Cho-024770	Choloepus hoffmanni	43.01	3.00e-65	241.00
IUUC-Cin-025621	Ciona intestinalis	36.23	3.00e-54	204.00
IUUC-Csv-026071	Ciona savignyi	37.18	1.00e-60	226.00
IUUC-Dre-028254	Danio rerio	37.91	2.00e-65	241.00
IUUC-Dno-029903	Dasypus novemcinctus	38.16	7.00e-68	249.00
IUUC-Dor-030423	Dipodomys ordii	38.16	8.00e-68	249.00
IUUC-Dme-031993	Drosophila melanogaster	31.09	8.00e-56	209.00
IUUC-Eca-033316	Equus caballus	38.16	6.00e-68	249.00
IUUC-Eeu-035001	Erinaceus europaeus	38.38	3.00e-68	251.00
IUUC-Fca-036447	Felis catus	38.16	7.00e-68	249.00
IUUC-Fal-037601	Ficedula albicollis	38.16	5.00e-68	250.00
IUUC-Gmo-038531	Gadus morhua	37.43	2.00e-61	228.00
IUUC-Gga-040869	Gallus gallus	38.44	1.00e-68	252.00
IUUC-Gac-042380	Gasterosteus aculeatus	37.40	5.00e-64	236.00
IUUC-Gma-043478	Glycine max	63.16	0.00e+00	632.00
IUUC-Ggo-045302	Gorilla gorilla	38.44	2.00e-68	251.00
IUUC-Hsa-045678	Homo sapiens	38.44	2.00e-68	251.00
IUUC-Hvu-047301	Hordeum vulgare	58.57	2.00e-150	523.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	38.16	7.00e-68	249.00
IUUC-Lch-050319	Latimeria chalumnae	37.91	1.00e-66	246.00
IUUC-Lpe-051440	Leersia perrieri	54.48	1.00e-122	432.00
IUUC-Loc-052035	Lepisosteus oculatus	37.91	3.00e-66	244.00
IUUC-Laf-054275	Loxodonta africana	38.16	7.00e-68	249.00
IUUC-Mcc-055857	Macaca mulatta	32.96	3.00e-45	174.00
IUUC-Meu-056194	Macropus eugenii	37.41	1.00e-24	105.00
IUUC-Mtr-058667	Medicago truncatula	61.91	5.00e-172	595.00
IUUC-Mga-059710	Meleagris gallopavo	38.44	1.00e-68	252.00
IUUC-Mmr-060604	Microcebus murinus	38.16	7.00e-68	249.00
IUUC-Mdo-062953	Monodelphis domestica	38.16	1.00e-67	249.00
IUUC-Mmu-064292	Mus musculus	38.16	7.00e-68	249.00
IUUC-Mac-064568	Musa acuminata	66.24	9.00e-152	528.00
IUUC-Mpu-066294	Mustela putorius furo	48.51	4.00e-35	140.00
IUUC-Mlu-067279	Myotis lucifugus	37.92	1.00e-67	249.00
IUUC-Nle-069322	Nomascus leucogenys	38.44	2.00e-68	251.00
IUUC-Opr-070580	Ochotona princeps	38.16	6.00e-68	249.00
IUUC-Ont-072554	Oreochromis niloticus	37.91	6.00e-66	243.00
IUUC-Oan-072856	Ornithorhynchus anatinus	37.88	3.00e-67	248.00
IUUC-Ocu-074150	Oryctolagus cuniculus	37.99	2.00e-67	248.00
IUUC-Oba-075585	Oryza barthii	53.51	8.00e-147	512.00
IUUC-Obr-076069	Oryza brachyantha	57.49	4.00e-149	520.00
IUUC-Ogl-077045	Oryza glaberrima	58.00	3.00e-160	556.00
IUUC-Ogu-078697	Oryza glumaepatula	57.79	2.00e-152	533.00
IUUC-Oin-080119	Oryza indica	58.00	3.00e-160	556.00
IUUC-Olo-081093	Oryza longistaminata	42.68	9.00e-83	301.00
IUUC-Ome-081718	Oryza meridionalis	49.40	3.00e-124	437.00
IUUC-Oni-082072	Oryza nivara	53.51	8.00e-147	512.00
IUUC-Opu-084080	Oryza punctata	49.00	4.00e-115	406.00
IUUC-Oru-085070	Oryza rufipogon	54.42	8.00e-147	513.00
IUUC-Osa-086149	Oryza sativa	58.00	3.00e-160	556.00
IUUC-Ola-086697	Oryzias latipes	37.91	2.00e-66	245.00
IUUC-Oga-088697	Otolemur garnettii	38.16	7.00e-68	249.00
IUUC-Oar-089774	Ovis aries	38.16	9.00e-68	249.00
IUUC-Ptr-090924	Pan troglodytes	38.44	2.00e-68	251.00
IUUC-Pan-092373	Papio anubis	38.44	2.00e-68	251.00
IUUC-Psi-094001	Pelodiscus sinensis	38.16	1.00e-67	249.00
IUUC-Pma-094274	Petromyzon marinus	35.79	3.00e-61	228.00
IUUC-Ppa-095562	Physcomitrella patens	60.12	2.00e-173	600.00
IUUC-Pfo-097235	Poecilia formosa	37.64	3.00e-65	241.00
IUUC-Pab-098608	Pongo abelii	38.44	2.00e-68	251.00
IUUC-Pca-100268	Procavia capensis	38.16	6.00e-68	249.00
IUUC-Ppe-101425	Prunus persica	66.26	0.00e+00	649.00
IUUC-Pva-103183	Pteropus vampyrus	38.16	7.00e-68	249.00
IUUC-Rno-105097	Rattus norvegicus	38.16	7.00e-68	249.00
IUUC-Sha-107642	Sarcophilus harrisii	38.16	1.00e-67	249.00
IUUC-Smo-108680	Selaginella moellendorffii	56.38	1.00e-154	538.00
IUUC-Sit-110471	Setaria italica	56.14	7.00e-155	539.00
IUUC-Sly-111143	Solanum lycopersicum	65.70	1.00e-102	365.00
IUUC-Stu-111926	Solanum tuberosum	54.13	2.00e-62	229.00
IUUC-Sar-112947	Sorex araneus	42.75	1.00e-64	238.00
IUUC-Sbi-113769	Sorghum bicolor	56.57	2.00e-149	521.00
IUUC-Ssc-115736	Sus scrofa	38.16	7.00e-68	249.00
IUUC-Tgu-117457	Taeniopygia guttata	38.16	5.00e-68	250.00
IUUC-Tru-117760	Takifugu rubripes	39.24	6.00e-67	246.00
IUUC-Tsy-118943	Tarsius syrichta	37.33	1.00e-63	236.00
IUUC-Tni-120081	Tetraodon nigroviridis	38.69	2.00e-66	245.00
IUUC-Tca-121190	Theobroma cacao	67.00	0.00e+00	663.00
IUUC-Tae-125535	Triticum aestivum	58.57	3.00e-145	506.00
IUUC-Tur-126329	Triticum urartu	60.21	1.00e-137	482.00
IUUC-Tbe-127878	Tupaia belangeri	37.88	3.00e-66	244.00
IUUC-Ttr-128985	Tursiops truncatus	38.16	7.00e-68	249.00
IUUC-Vpa-130147	Vicugna pacos	38.16	9.00e-68	249.00
IUUC-Vvi-130935	Vitis vinifera	66.60	0.00e+00	676.00
IUUC-Xtr-132482	Xenopus tropicalis	37.33	3.00e-67	248.00
IUUC-Xma-133929	Xiphophorus maculatus	37.64	3.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence