iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014431

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

BRADI_1g13620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G13620	BRADI1G13620.1	BRADI1G13620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-08	35.4	89	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlp.CgHvfhadC.lqkwpglknssskefrCPlCr 46
           Ca+Cl ++ +g   ++ +p CgH+fha+C +  w       +k+ +CP+Cr
   Q: 89   CALCLGEYGKGsalVRMVPaCGHFFHAECgIDGW------LRKRRTCPICR 133
           ********888555666669*********77***......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGPNLALVLE IAAVVALALL IVIVAVVFSP GGACDGAGGD AAGAGRVHAA DVESALGGMT 60
LMTTYEQVAA RKGKETETET EKEEERERCA LCLGEYGKGS ALVRMVPACG HFFHAECGID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGACCGA ACCTCGCACT CGTCCTCGAG ATCGCCGCCG TGGTGGCCCT GGCGCTGCTC 60
ATCGTCATCG TGGCCGTCGT CTTCTCCCCC GGCGGCGCCT GCGACGGGGC CGGCGGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:104582820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000217	Aegilops tauschii	59.09	3.00e-19	86.70
IUUC-Oba-075237	Oryza barthii	50.00	2.00e-15	74.30
IUUC-Ogl-077353	Oryza glaberrima	50.00	2.00e-15	74.30
IUUC-Ogu-078534	Oryza glumaepatula	50.00	2.00e-15	74.30
IUUC-Oin-080143	Oryza indica	50.00	2.00e-15	74.30
IUUC-Oni-082242	Oryza nivara	50.00	2.00e-15	74.30
IUUC-Opu-084084	Oryza punctata	44.44	2.00e-16	77.40
IUUC-Oru-084292	Oryza rufipogon	50.00	2.00e-15	74.30
IUUC-Osa-085815	Oryza sativa	50.00	1.00e-15	75.10
IUUC-Sit-109740	Setaria italica	52.69	6.00e-19	87.00
IUUC-Sbi-114758	Sorghum bicolor	53.19	1.00e-17	81.60
IUUC-Tae-124095	Triticum aestivum	69.05	5.00e-20	89.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence