iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-001150

Ensembl Protein ID

EMT00736

UniProt Accession

N1QPA3; N1QPA3_AEGTA

Genbank Protein ID

EMT00736.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Genbank Nucleotide ID

KD698543

Gene Name

F775_29252

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_29252	EMT00736	EMT00736

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	35.81	1.00e-45	181.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Aegilops tauschii

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAAPETSTCG AGPALLFPSS SSSSSSARVE AVVVFTICDS FVRRPDQAER VIGTLLGSVL 60
PDGTVHVRNA YVVPHSESAD QVALDIEYHH NMYASHQKVN PKEVLVGWFS TGFGVSGGST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGC CGGAGACCTC CACCTGCGGC GCGGGCCCCG CGCTCCTCTT CCCGTCGTCC 60
TCGTCCTCCT CGTCGTCCGC GCGGGTGGAG GCCGTCGTCG TATTCACCAT CTGCGACAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0016020--C:membrane
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0009793--P:embryo development ending in seed dormancy
GO:0001731--P:formation of translation preinitiation complex
GO:0009846--P:pollen germination
GO:0006446--P:regulation of translational initiation
GO:0009744--P:response to sucrose

KEGG

ats:F775_29252

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001527	Ailuropoda melanoleuca	37.19	2.00e-52	199.00
IUUC-Atr-002686	Amborella trichopoda	64.38	1.00e-95	341.00
IUUC-Apl-003977	Anas platyrhynchos	35.39	2.00e-43	167.00
IUUC-Aca-004335	Anolis carolinensis	36.84	5.00e-54	203.00
IUUC-Aly-005945	Arabidopsis lyrata	64.95	2.00e-103	367.00
IUUC-Ath-007045	Arabidopsis thaliana	63.57	7.00e-101	359.00
IUUC-Ago-007982	Ashbya gossypii	38.24	9.70e-01	28.50
IUUC-Acl-008365	Aspergillus clavatus	32.88	2.00e-41	162.00
IUUC-Afl-008742	Aspergillus flavus	32.41	2.00e-39	155.00
IUUC-Afu-009030	Aspergillus fumigatus	32.88	4.00e-41	161.00
IUUC-Ani-009212	Aspergillus nidulans	33.01	2.00e-41	162.00
IUUC-Ang-009712	Aspergillus niger	32.88	2.00e-41	162.00
IUUC-Aor-009885	Aspergillus oryzae	34.14	1.00e-40	159.00
IUUC-Ate-010315	Aspergillus terreus	31.86	3.00e-39	155.00
IUUC-Ame-010801	Astyanax mexicanus	48.19	4.00e-19	87.80
IUUC-Bgr-011982	Blumeria graminis	33.11	8.00e-39	153.00
IUUC-Bta-012804	Bos taurus	36.75	3.00e-53	201.00
IUUC-Bci-013891	Botrytis cinerea	32.21	6.00e-33	134.00
IUUC-Bdi-014328	Brachypodium distachyon	80.06	1.00e-128	451.00
IUUC-Bol-015446	Brassica oleracea	64.04	9.00e-104	369.00
IUUC-Bra-016862	Brassica rapa	63.36	2.00e-102	364.00
IUUC-Cel-018171	Caenorhabditis elegans	25.73	3.00e-22	98.60
IUUC-Cja-019335	Callithrix jacchus	37.19	2.00e-52	199.00
IUUC-Cfa-020138	Canis familiaris	36.84	4.00e-52	197.00
IUUC-Cpo-022109	Cavia porcellus	34.59	6.00e-42	163.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	41.52	8.00e-61	226.00
IUUC-Csa-023994	Chlorocebus sabaeus	37.19	1.00e-52	199.00
IUUC-Cho-024351	Choloepus hoffmanni	28.77	1.00e-28	120.00
IUUC-Cin-025801	Ciona intestinalis	36.46	8.00e-52	196.00
IUUC-Csv-025805	Ciona savignyi	38.19	7.00e-53	199.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	28.81	6.00e-33	134.00
IUUC-Cne-026868	Cryptococcus neoformans	28.11	6.00e-20	90.50
IUUC-Cme-027328	Cyanidioschyzon merolae	25.33	5.00e-20	90.90
IUUC-Dre-028085	Danio rerio	35.00	3.00e-52	197.00
IUUC-Dno-030099	Dasypus novemcinctus	37.19	2.00e-52	198.00
IUUC-Dor-030324	Dipodomys ordii	33.33	7.00e-43	167.00
IUUC-Dse-031314	Dothistroma septosporum	33.89	6.00e-42	164.00
IUUC-Dme-031926	Drosophila melanogaster	36.49	7.00e-49	186.00
IUUC-Ete-032569	Echinops telfairi	36.46	1.00e-48	185.00
IUUC-Eca-033502	Equus caballus	34.55	2.00e-48	185.00
IUUC-Eeu-034883	Erinaceus europaeus	33.33	2.00e-13	68.20
IUUC-Fca-035873	Felis catus	37.19	2.00e-52	199.00
IUUC-Fal-036921	Ficedula albicollis	38.25	2.00e-54	205.00
IUUC-Fox-037765	Fusarium oxysporum	29.70	8.00e-27	113.00
IUUC-Fso-038240	Fusarium solani	30.03	2.00e-27	115.00
IUUC-Gmo-038864	Gadus morhua	35.52	2.00e-53	201.00
IUUC-Ggr-039862	Gaeumannomyces graminis	27.80	3.00e-27	115.00
IUUC-Gga-040952	Gallus gallus	38.25	2.00e-54	204.00
IUUC-Gac-041677	Gasterosteus aculeatus	37.54	2.00e-58	218.00
IUUC-Gma-043061	Glycine max	66.78	1.00e-99	355.00
IUUC-Ggo-045591	Gorilla gorilla	37.19	1.00e-52	199.00
IUUC-Hsa-046860	Homo sapiens	37.19	1.00e-52	199.00
IUUC-Hvu-047410	Hordeum vulgare	82.86	3.00e-77	279.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	37.54	5.00e-53	200.00
IUUC-Lch-049410	Latimeria chalumnae	50.77	4.00e-34	137.00
IUUC-Lpe-051102	Leersia perrieri	77.88	9.00e-123	432.00
IUUC-Loc-052016	Lepisosteus oculatus	34.49	1.00e-43	169.00
IUUC-Lma-053157	Leptosphaeria maculans	32.59	1.00e-42	166.00
IUUC-Laf-054568	Loxodonta africana	37.19	2.00e-52	198.00
IUUC-Mcc-054613	Macaca mulatta	37.19	1.00e-52	199.00
IUUC-Meu-056832	Macropus eugenii	33.33	5.00e-14	70.10
IUUC-Mor-057104	Magnaporthe oryzae	27.18	1.00e-27	116.00
IUUC-Mtr-058445	Medicago truncatula	66.78	1.00e-116	411.00
IUUC-Mla-059038	Melampsora laricipopulina	30.24	4.00e-32	130.00
IUUC-Mga-059548	Meleagris gallopavo	36.14	6.00e-46	176.00
IUUC-Mvi-060520	Microbotryum violaceum	26.32	1.00e-16	80.10
IUUC-Mdo-062376	Monodelphis domestica	36.49	4.00e-53	201.00
IUUC-Mmu-063254	Mus musculus	37.54	2.00e-53	201.00
IUUC-Mac-065635	Musa acuminata	62.30	6.00e-103	366.00
IUUC-Mpu-066314	Mustela putorius furo	37.19	1.00e-52	199.00
IUUC-Mlu-067512	Myotis lucifugus	37.19	5.00e-53	201.00
IUUC-Nfi-068262	Neosartorya fischeri	32.88	4.00e-41	161.00
IUUC-Ncr-068872	Neurospora crassa	29.90	6.00e-30	124.00
IUUC-Nle-070118	Nomascus leucogenys	37.19	2.00e-52	199.00
IUUC-Opr-071228	Ochotona princeps	35.74	3.00e-45	174.00
IUUC-Ont-072600	Oreochromis niloticus	36.14	8.00e-56	209.00
IUUC-Oan-073584	Ornithorhynchus anatinus	34.54	4.00e-45	173.00
IUUC-Ocu-074542	Oryctolagus cuniculus	37.19	5.00e-53	200.00
IUUC-Oba-075923	Oryza barthii	77.99	3.00e-128	450.00
IUUC-Obr-076313	Oryza brachyantha	79.56	3.00e-125	440.00
IUUC-Ogl-076932	Oryza glaberrima	77.99	3.00e-128	450.00
IUUC-Ogu-078152	Oryza glumaepatula	77.99	3.00e-128	450.00
IUUC-Oin-079528	Oryza indica	77.99	3.00e-128	450.00
IUUC-Olo-080401	Oryza longistaminata	77.99	3.00e-128	450.00
IUUC-Ome-081553	Oryza meridionalis	77.67	7.00e-128	449.00
IUUC-Oni-082090	Oryza nivara	77.99	2.00e-128	450.00
IUUC-Opu-083583	Oryza punctata	78.30	3.00e-124	437.00
IUUC-Oru-084492	Oryza rufipogon	77.99	3.00e-128	450.00
IUUC-Osa-085383	Oryza sativa	77.99	3.00e-128	450.00
IUUC-Ola-086835	Oryzias latipes	36.24	3.00e-55	207.00
IUUC-Olu-087716	Ostreococcus lucimarinus	31.27	2.00e-34	138.00
IUUC-Oga-088886	Otolemur garnettii	36.84	2.00e-52	199.00
IUUC-Oar-090079	Ovis aries	36.75	2.00e-53	202.00
IUUC-Ptr-091457	Pan troglodytes	37.19	1.00e-52	199.00
IUUC-Pan-092317	Papio anubis	32.35	2.00e-28	118.00
IUUC-Psi-093129	Pelodiscus sinensis	35.13	1.00e-47	182.00
IUUC-Pma-094488	Petromyzon marinus	37.83	6.00e-59	220.00
IUUC-Pno-095049	Phaeosphaeria nodorum	33.23	2.00e-44	172.00
IUUC-Ppa-095341	Physcomitrella patens	52.74	1.00e-93	335.00
IUUC-Pfo-096286	Poecilia formosa	35.52	5.00e-55	207.00
IUUC-Pab-097765	Pongo abelii	37.19	1.00e-52	199.00
IUUC-Pop-099131	Populus trichocarpa	64.78	2.00e-109	387.00
IUUC-Pca-100524	Procavia capensis	28.92	2.00e-28	117.00
IUUC-Ppe-101934	Prunus persica	67.47	5.00e-118	416.00
IUUC-Pva-102577	Pteropus vampyrus	37.54	4.00e-53	201.00
IUUC-Pgr-103521	Puccinia graminis	28.85	4.00e-30	124.00
IUUC-Pte-104304	Pyrenophora teres	33.55	6.00e-45	173.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	33.55	1.00e-44	172.00
IUUC-Rno-105717	Rattus norvegicus	37.54	3.00e-53	201.00
IUUC-Sce-106337	Saccharomyces cerevisiae	23.08	8.90e-01	26.60
IUUC-Sha-107190	Sarcophilus harrisii	36.65	3.00e-52	198.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	29.97	3.00e-36	144.00
IUUC-Spo-108355	Schizosaccharomyces pombe	31.31	8.00e-37	146.00
IUUC-Smo-109374	Selaginella moellendorffii	55.82	2.00e-97	347.00
IUUC-Sit-110119	Setaria italica	79.38	1.00e-125	441.00
IUUC-Sly-111570	Solanum lycopersicum	66.44	9.00e-97	345.00
IUUC-Stu-112308	Solanum tuberosum	67.12	2.00e-106	377.00
IUUC-Sar-113515	Sorex araneus	42.11	7.00e-14	69.30
IUUC-Sbi-114605	Sorghum bicolor	78.34	2.00e-126	445.00
IUUC-Sre-114906	Sporisorium reilianum	31.40	2.00e-37	148.00
IUUC-Tgu-117087	Taeniopygia guttata	35.74	1.00e-45	175.00
IUUC-Tru-117700	Takifugu rubripes	36.21	7.00e-57	213.00
IUUC-Tni-120470	Tetraodon nigroviridis	35.54	7.00e-55	206.00
IUUC-Tca-121109	Theobroma cacao	67.81	1.00e-100	358.00
IUUC-Tre-122095	Trichoderma reesei	30.67	2.00e-28	118.00
IUUC-Tvi-122580	Trichoderma virens	30.33	1.00e-27	116.00
IUUC-Tae-125129	Triticum aestivum	89.94	1.00e-148	518.00
IUUC-Tur-126658	Triticum urartu	77.97	4.00e-124	436.00
IUUC-Tme-127043	Tuber melanosporum	33.56	3.00e-41	161.00
IUUC-Tbe-127927	Tupaia belangeri	37.19	2.00e-52	199.00
IUUC-Ttr-129231	Tursiops truncatus	37.19	1.00e-52	199.00
IUUC-Uma-129578	Ustilago maydis	32.19	8.00e-37	146.00
IUUC-Vda-129730	Verticillium dahliae	29.53	6.00e-33	134.00
IUUC-Vpa-130677	Vicugna pacos	51.72	2.70e-02	32.30
IUUC-Vvi-130968	Vitis vinifera	67.12	3.00e-108	383.00
IUUC-Xtr-132203	Xenopus tropicalis	36.14	6.00e-50	189.00
IUUC-Xma-133972	Xiphophorus maculatus	35.52	5.00e-55	206.00
IUUC-Yli-134553	Yarrowia lipolytica	30.69	3.00e-30	124.00
IUUC-Zma-134941	Zea mays	78.01	2.00e-114	404.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence