iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121614

Ensembl Protein ID

EOY21200

UniProt Accession

A0A061FUM9; A0A061FUM9_THECC

Genbank Protein ID

EOY21200.1

Protein Name

Zinc finger (C3HC4-type RING finger) family protein isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_012584

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_012584	EOY21201	EOY21201
TCM_012584	EOY21202	EOY21202
TCM_012584	EOY21200	EOY21200

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-09	37.9	135	184
E3 activity/RING/RING	2.70e-09	38.3	138	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteed 54
            ++C+  ++l+  Pv++p+G+ +  ++ +kw+ +g++tc ++r+++ +++
   Q: 135  SLNCSFCMQLPDRPVTTPCGHNFCLKCFQKWIGQGKRTCAKCRSTIPPKM 184
           578****************************************9987655 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ +++ p+++pCgH f+++C+qkw       +++ +C  Cr
   Q: 138  CSFCMQLPDR-PVTTPCGHNFCLKCFQKW-----IGQGKRTCAKCR 177
           **********.9*****************.....688888898887 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAHDSIQLPC DADGACMRCK ATPPTEETLT CSMCATPWHV ACLASPPETL VSTLQWHCPD 60
CSGDPLLSAA AVVDGSSSEL LASIKAIEAD ESLTEKEKAR KRQELVSGRV EEDGDTKKGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCCGACGT CTCCTATCCT GCGCATCAAT TGCGGATTGT TGTCAATGGC GCACGATAGC 60
ATCCAGCTCC CCTGCGATGC CGACGGCGCG TGCATGCGCT GCAAGGCGAC CCCTCCGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001285	Ailuropoda melanoleuca	45.78	3.00e-45	176.00
IUUC-Apl-003819	Anas platyrhynchos	34.96	1.00e-52	200.00
IUUC-Aca-005287	Anolis carolinensis	34.60	1.00e-49	190.00
IUUC-Aly-006276	Arabidopsis lyrata	72.96	0.00e+00	900.00
IUUC-Ath-006667	Arabidopsis thaliana	72.31	0.00e+00	871.00
IUUC-Ame-011845	Astyanax mexicanus	49.05	4.00e-46	179.00
IUUC-Bta-012600	Bos taurus	34.31	5.00e-50	191.00
IUUC-Bol-015519	Brassica oleracea	77.03	0.00e+00	929.00
IUUC-Bra-017110	Brassica rapa	77.07	0.00e+00	931.00
IUUC-Cja-018864	Callithrix jacchus	46.22	3.00e-46	179.00
IUUC-Cfa-020558	Canis familiaris	45.78	4.00e-45	176.00
IUUC-Cpo-022125	Cavia porcellus	36.12	5.00e-52	198.00
IUUC-Csa-023951	Chlorocebus sabaeus	31.20	3.00e-43	169.00
IUUC-Cho-024857	Choloepus hoffmanni	41.60	1.00e-20	94.40
IUUC-Cin-025454	Ciona intestinalis	35.93	4.00e-47	182.00
IUUC-Cne-026942	Cryptococcus neoformans	46.95	3.00e-31	127.00
IUUC-Dno-029523	Dasypus novemcinctus	47.14	4.00e-45	176.00
IUUC-Eeu-035077	Erinaceus europaeus	49.13	2.00e-37	149.00
IUUC-Fca-035685	Felis catus	47.60	7.00e-45	174.00
IUUC-Fal-037550	Ficedula albicollis	34.31	7.00e-52	197.00
IUUC-Gmo-038826	Gadus morhua	36.99	2.00e-48	186.00
IUUC-Gga-040484	Gallus gallus	34.98	2.00e-53	203.00
IUUC-Ggo-045414	Gorilla gorilla	46.22	5.00e-46	178.00
IUUC-Hsa-046236	Homo sapiens	46.22	4.00e-46	179.00
IUUC-Itr-047867	Ictidomys tridecemlineatus	46.67	1.00e-45	177.00
IUUC-Lch-050162	Latimeria chalumnae	48.57	5.00e-45	175.00
IUUC-Lpe-050756	Leersia perrieri	64.56	0.00e+00	797.00
IUUC-Lma-052953	Leptosphaeria maculans	25.56	1.00e-10	60.80
IUUC-Laf-053671	Loxodonta africana	45.54	1.00e-44	174.00
IUUC-Mcc-055513	Macaca mulatta	45.78	2.00e-45	176.00
IUUC-Meu-056189	Macropus eugenii	53.28	2.00e-29	123.00
IUUC-Mga-059759	Meleagris gallopavo	34.54	1.00e-53	204.00
IUUC-Mvi-060378	Microbotryum violaceum	53.80	9.00e-34	137.00
IUUC-Mmr-060646	Microcebus murinus	42.52	3.00e-40	159.00
IUUC-Mdo-061911	Monodelphis domestica	47.51	3.00e-46	179.00
IUUC-Mac-064697	Musa acuminata	67.00	0.00e+00	820.00
IUUC-Mpu-065696	Mustela putorius furo	45.78	3.00e-45	176.00
IUUC-Mlu-067538	Myotis lucifugus	48.08	4.00e-45	175.00
IUUC-Ncr-068942	Neurospora crassa	29.92	3.00e-07	49.30
IUUC-Ont-072019	Oreochromis niloticus	47.17	2.00e-46	180.00
IUUC-Oan-073109	Ornithorhynchus anatinus	47.20	2.00e-45	176.00
IUUC-Oba-075108	Oryza barthii	64.00	0.00e+00	799.00
IUUC-Obr-076572	Oryza brachyantha	63.62	0.00e+00	777.00
IUUC-Ogl-077177	Oryza glaberrima	64.00	0.00e+00	799.00
IUUC-Ogu-078298	Oryza glumaepatula	64.00	0.00e+00	800.00
IUUC-Oin-079911	Oryza indica	64.00	0.00e+00	800.00
IUUC-Ome-081137	Oryza meridionalis	61.44	0.00e+00	753.00
IUUC-Oni-082620	Oryza nivara	64.00	0.00e+00	800.00
IUUC-Opu-083974	Oryza punctata	63.64	0.00e+00	794.00
IUUC-Oru-084976	Oryza rufipogon	64.00	0.00e+00	800.00
IUUC-Osa-085339	Oryza sativa	64.00	0.00e+00	800.00
IUUC-Ola-086416	Oryzias latipes	49.52	3.00e-46	179.00
IUUC-Oga-088221	Otolemur garnettii	45.98	3.00e-45	176.00
IUUC-Ptr-090559	Pan troglodytes	46.22	5.00e-46	178.00
IUUC-Pan-092855	Papio anubis	46.61	3.00e-45	176.00
IUUC-Psi-093033	Pelodiscus sinensis	47.66	1.00e-46	180.00
IUUC-Pma-094339	Petromyzon marinus	49.53	4.00e-46	179.00
IUUC-Pno-095043	Phaeosphaeria nodorum	55.88	6.00e-06	44.30
IUUC-Pfo-097186	Poecilia formosa	46.70	6.00e-46	178.00
IUUC-Pab-098243	Pongo abelii	46.22	5.00e-46	178.00
IUUC-Pca-100503	Procavia capensis	45.78	6.00e-46	178.00
IUUC-Ppe-101961	Prunus persica	75.22	0.00e+00	894.00
IUUC-Pva-102240	Pteropus vampyrus	45.78	3.00e-45	176.00
IUUC-Sha-106618	Sarcophilus harrisii	47.73	4.00e-46	179.00
IUUC-Smo-109319	Selaginella moellendorffii	54.73	0.00e+00	625.00
IUUC-Sit-110588	Setaria italica	59.16	0.00e+00	772.00
IUUC-Sar-113546	Sorex araneus	46.40	8.00e-24	104.00
IUUC-Sbi-114726	Sorghum bicolor	61.89	0.00e+00	772.00
IUUC-Sre-115182	Sporisorium reilianum	44.25	2.00e-33	135.00
IUUC-Ssc-116081	Sus scrofa	45.33	2.00e-44	173.00
IUUC-Tgu-116945	Taeniopygia guttata	47.66	1.00e-46	180.00
IUUC-Tru-117599	Takifugu rubripes	34.16	2.00e-51	196.00
IUUC-Tsy-119249	Tarsius syrichta	31.44	2.00e-45	176.00
IUUC-Tni-119843	Tetraodon nigroviridis	35.20	6.00e-53	201.00
IUUC-Tme-127149	Tuber melanosporum	46.20	1.00e-26	113.00
IUUC-Tbe-127823	Tupaia belangeri	32.29	2.00e-37	150.00
IUUC-Ttr-128215	Tursiops truncatus	33.98	9.00e-44	171.00
IUUC-Vpa-130073	Vicugna pacos	31.54	1.00e-43	171.00
IUUC-Xtr-132771	Xenopus tropicalis	45.41	8.00e-44	171.00
IUUC-Xma-133888	Xiphophorus maculatus	46.70	1.00e-45	177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence