iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014982

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

BRADI_1g33790

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G33790	BRADI1G33790.1	BRADI1G33790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.50e-07	29.8	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   + +++lp C H fh +C+  w         + +CPlCr
   Q: 118  CAVCLGRFepTEALRLLPkCRHGFHVECVDTW------LDAHSTCPLCR 160
           ********7744499999**************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MEPSRRLLLS DYDGAIVSPL PSPTPSASAT PFRPGVAVVV GILTSVFSIT FLLLLYAKHC 60
KRSAAESSGP YGSGSAGVGG AAGGGEGRRN SGVDRAVVES LPVFRFGALR GQKAGLECAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCCGT CGCGGCGGCT GCTCCTCTCG GACTACGACG GCGCGATCGT GTCGCCGCTG 60
CCGTCCCCGA CGCCGTCTGC GTCGGCCACG CCCTTCAGGC CAGGCGTGGC AGTGGTGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR007110--Ig-like_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50835--IG_LIKE
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100844632

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003122	Amborella trichopoda	41.72	3.00e-62	231.00
IUUC-Aly-006151	Arabidopsis lyrata	43.18	6.00e-66	243.00
IUUC-Ath-007131	Arabidopsis thaliana	42.19	6.00e-59	220.00
IUUC-Bol-015760	Brassica oleracea	41.53	9.00e-66	243.00
IUUC-Bra-017357	Brassica rapa	42.24	1.00e-64	239.00
IUUC-Gma-042757	Glycine max	41.51	6.00e-53	200.00
IUUC-Hvu-047245	Hordeum vulgare	79.17	3.00e-119	421.00
IUUC-Lpe-051226	Leersia perrieri	75.40	1.00e-110	392.00
IUUC-Mtr-057973	Medicago truncatula	38.75	2.00e-51	195.00
IUUC-Mac-065494	Musa acuminata	49.40	8.00e-62	229.00
IUUC-Oba-075267	Oryza barthii	80.65	8.00e-120	422.00
IUUC-Ogl-077528	Oryza glaberrima	80.71	1.00e-115	409.00
IUUC-Ogu-078754	Oryza glumaepatula	80.69	1.00e-121	428.00
IUUC-Oin-079781	Oryza indica	80.65	1.00e-120	425.00
IUUC-Ome-081863	Oryza meridionalis	81.39	5.00e-122	429.00
IUUC-Oni-082943	Oryza nivara	80.65	1.00e-120	425.00
IUUC-Opu-083466	Oryza punctata	80.65	1.00e-130	458.00
IUUC-Oru-084675	Oryza rufipogon	80.65	1.00e-120	425.00
IUUC-Osa-085804	Oryza sativa	81.34	8.00e-132	462.00
IUUC-Ppa-095281	Physcomitrella patens	53.59	2.00e-35	142.00
IUUC-Pop-099148	Populus trichocarpa	45.22	4.00e-65	241.00
IUUC-Ppe-102095	Prunus persica	47.76	2.00e-58	219.00
IUUC-Sit-109970	Setaria italica	79.54	2.00e-118	417.00
IUUC-Sly-111677	Solanum lycopersicum	42.26	5.00e-60	224.00
IUUC-Stu-112327	Solanum tuberosum	61.84	4.00e-53	201.00
IUUC-Sbi-114529	Sorghum bicolor	79.73	2.00e-118	417.00
IUUC-Tca-121197	Theobroma cacao	44.10	2.00e-39	155.00
IUUC-Tae-123746	Triticum aestivum	80.64	7.00e-129	452.00
IUUC-Vvi-131553	Vitis vinifera	45.66	3.00e-72	265.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence