iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f+Cp+++e+M+dPv++++G+t +r+++ +w++s g+     cPvt+q+l  ++l  n +l+ +iq+w  +n+
   Q: 299  PYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNsdeiNCPVTGQKL-TTELSANVVLKTIIQEWKVRNE 373
           5799*******************************988888889*********.789**************99986 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSQEEDIGT SDTLIGSLLR SISEVITSLE SLQAETERFL ECACYFYRVS VVLMEIQTAE 60
SNVICSIDIF ESLSDSVDVA KKLVEKSQES NEAESTTDLR SIEAGFEGVV KQMGETLQSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACTTTCTC TAACCATCAT CATTCATTCA CCTTTTGGTT TGTGGTCTGA CCAATCTGCA 60
GAGAGATAGT GCAAGAAGAA ACAAACAAAG TCAACAAAAT CCAAACACAT GTTTTCGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	40.29	2.00e-171	595.00
IUUC-Atr-002664	Amborella trichopoda	45.70	2.00e-174	605.00
IUUC-Aly-006424	Arabidopsis lyrata	94.89	0.00e+00	1910.00
IUUC-Bdi-014572	Brachypodium distachyon	44.60	1.00e-180	626.00
IUUC-Bol-016179	Brassica oleracea	82.97	0.00e+00	1665.00
IUUC-Bra-017617	Brassica rapa	83.25	0.00e+00	1616.00
IUUC-Hvu-047634	Hordeum vulgare	43.84	1.00e-173	603.00
IUUC-Lpe-050817	Leersia perrieri	41.96	0.00e+00	627.00
IUUC-Mac-065538	Musa acuminata	43.53	0.00e+00	627.00
IUUC-Oba-075004	Oryza barthii	42.70	2.00e-180	626.00
IUUC-Obr-076391	Oryza brachyantha	42.12	6.00e-160	557.00
IUUC-Ogl-077375	Oryza glaberrima	42.70	2.00e-180	626.00
IUUC-Ogu-078488	Oryza glumaepatula	42.82	0.00e+00	630.00
IUUC-Oin-079369	Oryza indica	42.77	0.00e+00	629.00
IUUC-Olo-080998	Oryza longistaminata	42.54	4.00e-172	598.00
IUUC-Ome-081243	Oryza meridionalis	42.44	6.00e-179	620.00
IUUC-Oni-082268	Oryza nivara	42.95	0.00e+00	630.00
IUUC-Opu-083388	Oryza punctata	43.16	0.00e+00	653.00
IUUC-Oru-084387	Oryza rufipogon	42.70	0.00e+00	630.00
IUUC-Osa-086255	Oryza sativa	42.77	0.00e+00	629.00
IUUC-Pop-099123	Populus trichocarpa	55.89	0.00e+00	867.00
IUUC-Ppe-101776	Prunus persica	51.24	0.00e+00	952.00
IUUC-Sit-110322	Setaria italica	43.95	2.00e-171	595.00
IUUC-Sly-111047	Solanum lycopersicum	45.54	0.00e+00	865.00
IUUC-Stu-112113	Solanum tuberosum	44.92	0.00e+00	829.00
IUUC-Sbi-113818	Sorghum bicolor	41.94	2.00e-170	592.00
IUUC-Tca-121365	Theobroma cacao	54.10	0.00e+00	1037.00
IUUC-Tae-123677	Triticum aestivum	43.10	1.00e-170	593.00
IUUC-Tur-126161	Triticum urartu	42.73	5.00e-169	587.00
IUUC-Vvi-131502	Vitis vinifera	58.47	0.00e+00	887.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence