iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000359

Ensembl Protein ID

EMT13198

UniProt Accession

R7W2N7; R7W2N7_AEGTA

Genbank Protein ID

EMT13198.1

Protein Name

RING finger protein 4

Genbank Nucleotide ID

KD547726

Gene Name

F775_07649

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_07649	EMT13198	EMT13198

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-09	36.5	86	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ ++  p  ++CgHvf+++C+++        + + +CP+Cr
   Q: 86   CPVCLNKMEL-PSATSCGHVFCEKCIKAA------IKAQKKCPTCR 124
           ********99.999************999......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MGTRRSRAKI KRRVVVVDLE ADADQEGCGD ARTTFNRLSG NKRRKVPPVI SLSPDREERS 60
SNQRNSTVRV SRPSANAAPN EPTFTCPVCL NKMELPSATS CGHVFCEKCI KAAIKAQKKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTACGG TCGGCGCTTG GAGGCGAGCA CAGGATGGTT CCGTCACTAC CGGTGAAGCC 60
GTCGAGGACC TGGATCGATC TCCCATCGCC GCCGGCGGCG GCGGCGGGGG NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_07649

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006041	Arabidopsis lyrata	41.79	2.00e-16	78.20
IUUC-Ath-007007	Arabidopsis thaliana	39.69	6.00e-17	79.70
IUUC-Bol-016562	Brassica oleracea	47.25	1.00e-18	85.10
IUUC-Bra-016652	Brassica rapa	47.25	9.00e-18	84.00
IUUC-Cfa-020868	Canis familiaris	38.71	8.00e-11	59.30
IUUC-Csv-026318	Ciona savignyi	47.76	1.00e-12	65.50
IUUC-Eeu-034603	Erinaceus europaeus	35.21	5.00e-11	58.90
IUUC-Gac-042194	Gasterosteus aculeatus	31.85	2.00e-12	64.70
IUUC-Lpe-051693	Leersia perrieri	56.52	2.00e-39	154.00
IUUC-Mla-058946	Melampsora laricipopulina	42.86	1.00e-07	50.40
IUUC-Ocu-074030	Oryctolagus cuniculus	32.65	9.00e-11	58.90
IUUC-Obr-076406	Oryza brachyantha	57.25	1.00e-38	152.00
IUUC-Oin-079762	Oryza indica	56.83	3.00e-37	148.00
IUUC-Olo-081000	Oryza longistaminata	57.55	9.00e-39	152.00
IUUC-Ome-081927	Oryza meridionalis	50.36	2.00e-30	125.00
IUUC-Opu-083381	Oryza punctata	47.55	4.00e-29	119.00
IUUC-Oru-085126	Oryza rufipogon	56.83	2.00e-37	149.00
IUUC-Osa-085470	Oryza sativa	56.12	4.00e-38	150.00
IUUC-Ptr-091254	Pan troglodytes	34.12	5.00e-11	60.10
IUUC-Pab-097663	Pongo abelii	34.94	1.00e-10	59.30
IUUC-Pca-100293	Procavia capensis	51.11	3.00e-07	48.10
IUUC-Sja-107944	Schizosaccharomyces japonicus	47.06	6.00e-10	57.00
IUUC-Tae-123990	Triticum aestivum	100.00	9.00e-71	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence