iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131187

UUCD1 version

UUC-ViV-00916

Ensembl Protein ID

VIT_03s0038g03660.t01

UniProt Accession

F6I0T1; F6I0T1_VITVI

Genbank Protein ID

CCB60547.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596508

Gene Name

VIT_03s0038g03660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0038g03660	VIT_03s0038g03660.t01	VIT_03s0038g03660.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-33	115.4	260	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+eflCpIsle+M+dPv++++G+ty+r+sI+kwl+s+++tcP+t+q+l + +l Pn++lr+li +wce+n+ 
   Q: 260  IPHEFLCPISLEIMTDPVIVATGQTYERESIQKWLDSDHHTCPKTGQTLVHLSLAPNYALRNLILQWCEKNQF 332
           89********************************************************************985 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEGETGEKGS VCGSSEGDVI GEMMEVIENV GSYVGFRRTQ RKESLNLVRR LKLLVPLLEE 60
LRELGTAAVS GEALGCLARL KKALVSAKKL LKNCNYGSKI YLAHESEAVA VRFHAVYDKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA AAAAACCCAA GGGATAGGGA AAAGAATCTA CTATACTATG TCTTCACTCT 60
TCCCACTTTA TTTTCTCGGA AAATGGAGCT AACCCTTTTC CTGGAAAGCC ACATTTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100250244

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000398	Aegilops tauschii	59.34	0.00e+00	663.00
IUUC-Atr-002787	Amborella trichopoda	67.04	0.00e+00	790.00
IUUC-Aly-006301	Arabidopsis lyrata	63.02	0.00e+00	778.00
IUUC-Ath-007379	Arabidopsis thaliana	62.44	0.00e+00	768.00
IUUC-Bdi-014851	Brachypodium distachyon	59.77	0.00e+00	660.00
IUUC-Bol-016076	Brassica oleracea	64.47	0.00e+00	786.00
IUUC-Bra-017350	Brassica rapa	63.80	0.00e+00	775.00
IUUC-Hvu-047325	Hordeum vulgare	60.98	0.00e+00	689.00
IUUC-Lpe-051266	Leersia perrieri	55.37	0.00e+00	645.00
IUUC-Mtr-058419	Medicago truncatula	63.67	0.00e+00	768.00
IUUC-Mac-065150	Musa acuminata	53.33	3.00e-178	617.00
IUUC-Oba-075533	Oryza barthii	59.21	0.00e+00	664.00
IUUC-Obr-076561	Oryza brachyantha	60.20	0.00e+00	682.00
IUUC-Ogl-077209	Oryza glaberrima	59.21	0.00e+00	664.00
IUUC-Ogu-078607	Oryza glumaepatula	59.54	0.00e+00	667.00
IUUC-Oin-080162	Oryza indica	59.54	0.00e+00	667.00
IUUC-Olo-080856	Oryza longistaminata	59.21	0.00e+00	666.00
IUUC-Ome-081763	Oryza meridionalis	59.54	0.00e+00	670.00
IUUC-Oni-082893	Oryza nivara	59.54	0.00e+00	667.00
IUUC-Opu-084068	Oryza punctata	59.38	0.00e+00	672.00
IUUC-Oru-085267	Oryza rufipogon	59.54	0.00e+00	667.00
IUUC-Osa-085448	Oryza sativa	59.54	0.00e+00	667.00
IUUC-Pop-100078	Populus trichocarpa	76.72	0.00e+00	875.00
IUUC-Ppe-101290	Prunus persica	75.47	0.00e+00	932.00
IUUC-Sit-110463	Setaria italica	59.66	0.00e+00	643.00
IUUC-Sly-111424	Solanum lycopersicum	64.78	0.00e+00	803.00
IUUC-Stu-112097	Solanum tuberosum	64.94	0.00e+00	804.00
IUUC-Sbi-113821	Sorghum bicolor	60.89	0.00e+00	627.00
IUUC-Ssc-116061	Sus scrofa	29.19	8.00e-11	62.40
IUUC-Tca-121039	Theobroma cacao	78.96	0.00e+00	927.00
IUUC-Tae-122916	Triticum aestivum	60.49	0.00e+00	683.00
IUUC-Tur-126004	Triticum urartu	60.48	0.00e+00	652.00
IUUC-Ttr-128612	Tursiops truncatus	29.55	4.00e-11	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence