iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120988

Ensembl Protein ID

EOY16467

UniProt Accession

A0A061FHB0; A0A061FHB0_THECC

Genbank Protein ID

EOY16466.1; EOY16467.1

Protein Name

RING/FYVE/PHD-type zinc finger family protein, putative isoform 1

Genbank Nucleotide ID

CM001886; CM001886

Gene Name

TCM_035226

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_035226	EOY16467	EOY16467

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.50e-16	60.1	476	523

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedek..slveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +C+++  d++  ++v C+ C+ ++H  C+k++  ++ p+ + w+C+kC+
   Q: 476  C-LCRNCLTDKDddKIVLCDGCDAAYHIYCMKPP-RTSIPRGK-WFCRKCD 523
           6.7887766554459*******************.*******7.******7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVVEEGTSNG EGAECGKVVQ CFKSEPVNNG FGFEFVNDSG DGSSGASENF RTYKRRRQLR 60
SSSKVKVQVD RRASTDQVPL AETNHCASLN GSNDHLQRQW RNVVLEHMHQ LLSGDEGGIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGGATTTT AGTTCAATTA CTTAGCTTAA TTTGGTCGAA AGTTTTTGTG TTCCTCGTTT 60
TTCGTGGAGC TGAAGGGCAG GGGATGGTTT GTTTTGAGTT CAATTTTCTT TTTGTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000842	Aegilops tauschii	32.35	6.00e-64	237.00
IUUC-Atr-003036	Amborella trichopoda	33.25	1.00e-49	190.00
IUUC-Aly-005677	Arabidopsis lyrata	45.02	2.00e-106	379.00
IUUC-Ath-007282	Arabidopsis thaliana	45.31	4.00e-106	377.00
IUUC-Bdi-014741	Brachypodium distachyon	31.66	1.00e-66	246.00
IUUC-Bol-016121	Brassica oleracea	44.00	2.00e-95	342.00
IUUC-Bra-018006	Brassica rapa	46.98	3.00e-89	321.00
IUUC-Cin-025168	Ciona intestinalis	38.10	6.00e-12	63.50
IUUC-Gma-043298	Glycine max	49.92	2.00e-157	548.00
IUUC-Hvu-047140	Hordeum vulgare	31.35	2.00e-67	249.00
IUUC-Lpe-051590	Leersia perrieri	33.59	3.00e-66	246.00
IUUC-Mtr-058493	Medicago truncatula	49.90	6.00e-135	474.00
IUUC-Mac-065162	Musa acuminata	41.24	5.00e-83	301.00
IUUC-Oba-075978	Oryza barthii	32.55	3.00e-70	258.00
IUUC-Obr-076162	Oryza brachyantha	33.94	6.00e-70	257.00
IUUC-Ogl-077688	Oryza glaberrima	31.93	4.00e-45	174.00
IUUC-Ogu-078286	Oryza glumaepatula	32.73	7.00e-71	260.00
IUUC-Oin-079536	Oryza indica	32.73	2.00e-70	259.00
IUUC-Olo-081087	Oryza longistaminata	31.79	1.00e-70	261.00
IUUC-Ome-081892	Oryza meridionalis	32.44	2.00e-71	263.00
IUUC-Oni-082124	Oryza nivara	32.73	1.00e-70	259.00
IUUC-Opu-084017	Oryza punctata	37.10	5.00e-67	248.00
IUUC-Oru-084542	Oryza rufipogon	32.73	9.00e-71	260.00
IUUC-Osa-086025	Oryza sativa	32.73	9.00e-71	260.00
IUUC-Pop-099385	Populus trichocarpa	52.36	6.00e-159	553.00
IUUC-Ppe-101709	Prunus persica	49.67	3.00e-161	561.00
IUUC-Sit-110064	Setaria italica	33.88	3.00e-70	259.00
IUUC-Sly-111296	Solanum lycopersicum	47.08	1.00e-130	459.00
IUUC-Stu-112523	Solanum tuberosum	51.53	6.00e-82	296.00
IUUC-Tae-124906	Triticum aestivum	31.42	1.00e-71	263.00
IUUC-Tur-126151	Triticum urartu	32.15	2.00e-62	233.00
IUUC-Ttr-129162	Tursiops truncatus	33.03	2.00e-13	73.20
IUUC-Vvi-130984	Vitis vinifera	49.23	4.00e-165	573.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence