iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099322

Ensembl Protein ID

POPTR_0011s01570.1

UniProt Accession

B9HZB2; B9HZB2_POPTR

Genbank Protein ID

EEE97762.1

Protein Name

Bromo-adjacent homology (BAH) domain-containing family protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTR_0011s01570g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s01570	POPTR_0011s01570.1	POPTR_0011s01570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.80e-08	35.6	149	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++w+HpaC+ +++ee ++ ++ ++C++C s
   Q: 149  YC-KCEMPYNPDDLMVQCEGCKDWYHPACVDMTIEEAKKLDH-FMCSECAS 197
           78.7*****************************888888887.******86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAKTRPGGII SKPKTGKRDL ESYTIRGTTK VVRAGDCVLM RPSDTGRPSY VAKIEAIEAD 60
SRNNVKVRVR WYYRPEESLG GRRQFHGAKE LFLSDHYDVQ SAHTIEGKCI VHSFKNYTKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAATGTCA AGAAGCTAGG GTTTCTCTCC CTCCAAAATC TCCACTCCAC TTTCTACCAA 60
AATCCCTCTT CATCAGTATC AAGAAGAGAA GACACTTGAA GTCTTAAGGT CCCATGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

pop:POPTR_0011s01570g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	82.87	2.00e-110	390.00
IUUC-Bgr-012210	Blumeria graminis	49.09	2.00e-09	56.60
IUUC-Gma-043024	Glycine max	81.78	1.00e-110	391.00
IUUC-Mla-058837	Melampsora laricipopulina	39.58	3.00e-05	43.10
IUUC-Mac-065355	Musa acuminata	79.17	1.00e-100	358.00
IUUC-Ogu-078663	Oryza glumaepatula	73.61	3.00e-96	343.00
IUUC-Oin-079894	Oryza indica	73.15	4.00e-96	343.00
IUUC-Olo-080411	Oryza longistaminata	75.77	1.00e-93	334.00
IUUC-Ome-081623	Oryza meridionalis	73.15	3.00e-95	340.00
IUUC-Oni-082587	Oryza nivara	73.15	4.00e-96	343.00
IUUC-Oru-084597	Oryza rufipogon	72.69	2.00e-95	340.00
IUUC-Osa-086057	Oryza sativa	73.15	4.00e-96	343.00
IUUC-Olu-087802	Ostreococcus lucimarinus	46.99	3.00e-42	163.00
IUUC-Ppa-095645	Physcomitrella patens	67.58	1.00e-83	301.00
IUUC-Ppe-101758	Prunus persica	81.94	4.00e-109	386.00
IUUC-Ptt-103983	Puccinia triticina	33.96	2.00e-05	42.70
IUUC-Smo-109403	Selaginella moellendorffii	68.20	1.00e-88	318.00
IUUC-Sly-111450	Solanum lycopersicum	77.78	2.00e-104	370.00
IUUC-Tca-121596	Theobroma cacao	88.48	6.00e-115	405.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence