iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126461

Ensembl Protein ID

TRIUR3_22993-P1

UniProt Accession

M8A7R3; M8A7R3_TRIUA

Genbank Protein ID

EMS56494.1

Protein Name

PHD finger protein 2

Genbank Nucleotide ID

KD157378

Gene Name

TRIUR3_22993

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_22993	TRIUR3_22993-T1	TRIUR3_22993-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.90e-09	36.7	108	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp+C+++++e+ ++ + ++ C +C +
   Q: 108  YC-KCEMPYNPDDLMVQCEGCKDWFHPTCMGMTIEQAKKLD-TFLCADCAK 156
           78.7*****************************77777666.5******86 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MAKTKQGKRD IDSYTIRGTT KVVRVGDCVL MRPSDTDNAP YVARVESLES DGRGSVRVRS 60
AHTIEGKCIV HSFKNYTKLD NVGPEDFFCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAAGA CCAAGCAGGG CAAGAGGGAC ATCGACTCCT ACACCATCAG GGGCACCACC 60
AAGGTCGTCC GAGGTACGTG CTCTCCTTGA TGCTGCTGCT GCATCGCCAT TTCCGCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002427	Ailuropoda melanoleuca	40.00	2.00e-10	60.10
IUUC-Atr-002986	Amborella trichopoda	68.52	1.00e-79	288.00
IUUC-Aca-005043	Anolis carolinensis	41.82	2.00e-11	64.30
IUUC-Aly-005717	Arabidopsis lyrata	61.66	2.00e-69	254.00
IUUC-Ath-007631	Arabidopsis thaliana	61.66	2.00e-69	254.00
IUUC-Ago-007912	Ashbya gossypii	43.33	4.70e-02	31.60
IUUC-Ame-011579	Astyanax mexicanus	42.00	5.00e-11	62.80
IUUC-Bgr-012210	Blumeria graminis	44.44	5.00e-07	48.10
IUUC-Bdi-014153	Brachypodium distachyon	76.39	3.00e-86	310.00
IUUC-Bol-016238	Brassica oleracea	60.93	6.00e-72	262.00
IUUC-Bra-017570	Brassica rapa	60.47	4.00e-71	259.00
IUUC-Cja-018757	Callithrix jacchus	39.62	5.00e-10	58.90
IUUC-Cfa-021156	Canis familiaris	36.36	2.00e-10	60.80
IUUC-Cpo-022284	Cavia porcellus	40.00	1.00e-10	61.20
IUUC-Cre-022934	Chlamydomonas reinhardtii	34.05	2.00e-25	107.00
IUUC-Csa-023515	Chlorocebus sabaeus	40.00	2.00e-10	60.50
IUUC-Cne-026894	Cryptococcus neoformans	40.30	1.00e-09	57.00
IUUC-Dre-028285	Danio rerio	42.00	4.00e-11	63.20
IUUC-Dno-029446	Dasypus novemcinctus	40.00	1.00e-10	60.80
IUUC-Ete-032380	Echinops telfairi	40.00	2.00e-10	60.80
IUUC-Eca-034302	Equus caballus	40.00	2.00e-10	60.50
IUUC-Fca-035578	Felis catus	40.00	2.00e-10	60.50
IUUC-Fal-037017	Ficedula albicollis	43.64	3.00e-12	67.00
IUUC-Gmo-038789	Gadus morhua	38.18	3.00e-10	60.10
IUUC-Gga-040290	Gallus gallus	43.64	6.00e-12	65.90
IUUC-Gac-041666	Gasterosteus aculeatus	36.36	7.00e-10	58.90
IUUC-Gma-044320	Glycine max	63.43	6.00e-77	279.00
IUUC-Ggo-044712	Gorilla gorilla	40.00	2.00e-10	60.50
IUUC-Hsa-046760	Homo sapiens	43.64	6.00e-12	65.90
IUUC-Hvu-047723	Hordeum vulgare	47.44	5.00e-52	196.00
IUUC-Lch-049793	Latimeria chalumnae	40.00	2.00e-10	60.80
IUUC-Lpe-051400	Leersia perrieri	75.46	7.00e-85	305.00
IUUC-Loc-051927	Lepisosteus oculatus	40.00	4.00e-11	63.20
IUUC-Lma-053190	Leptosphaeria maculans	30.16	1.00e-04	42.40
IUUC-Laf-053656	Loxodonta africana	40.00	2.00e-10	60.50
IUUC-Mcc-055658	Macaca mulatta	40.00	2.00e-10	60.50
IUUC-Mtr-057710	Medicago truncatula	64.81	1.00e-73	268.00
IUUC-Mmr-061132	Microcebus murinus	43.64	6.00e-12	65.90
IUUC-Mmu-063458	Mus musculus	43.64	5.00e-12	66.20
IUUC-Mac-065355	Musa acuminata	66.20	6.00e-77	278.00
IUUC-Mpu-066429	Mustela putorius furo	40.00	2.00e-10	60.50
IUUC-Mlu-067746	Myotis lucifugus	40.00	3.00e-10	60.50
IUUC-Nle-070143	Nomascus leucogenys	40.00	2.00e-10	60.50
IUUC-Ont-071935	Oreochromis niloticus	40.00	4.00e-08	53.10
IUUC-Oan-073654	Ornithorhynchus anatinus	40.00	3.00e-10	60.10
IUUC-Ocu-074417	Oryctolagus cuniculus	40.00	2.00e-10	60.50
IUUC-Oba-075188	Oryza barthii	73.20	1.00e-80	291.00
IUUC-Obr-076844	Oryza brachyantha	69.91	3.00e-82	296.00
IUUC-Ogl-077260	Oryza glaberrima	69.91	3.00e-82	296.00
IUUC-Ogu-078663	Oryza glumaepatula	76.39	1.00e-86	311.00
IUUC-Oin-079894	Oryza indica	75.93	2.00e-86	310.00
IUUC-Olo-080411	Oryza longistaminata	75.26	2.00e-83	300.00
IUUC-Ome-081623	Oryza meridionalis	75.93	9.00e-86	308.00
IUUC-Oni-082587	Oryza nivara	75.93	2.00e-86	310.00
IUUC-Opu-083591	Oryza punctata	77.31	2.00e-87	313.00
IUUC-Oru-084597	Oryza rufipogon	75.93	2.00e-86	310.00
IUUC-Osa-086057	Oryza sativa	75.93	2.00e-86	310.00
IUUC-Ola-087236	Oryzias latipes	42.00	6.00e-11	62.40
IUUC-Olu-087802	Ostreococcus lucimarinus	47.37	2.00e-25	107.00
IUUC-Oga-088662	Otolemur garnettii	40.00	2.00e-10	60.50
IUUC-Oar-090332	Ovis aries	40.00	3.00e-10	60.50
IUUC-Ptr-091328	Pan troglodytes	43.64	6.00e-12	65.90
IUUC-Pan-092346	Papio anubis	38.00	2.00e-10	60.50
IUUC-Pma-094621	Petromyzon marinus	39.62	5.00e-10	58.20
IUUC-Ppa-095645	Physcomitrella patens	54.79	2.00e-57	214.00
IUUC-Pfo-096227	Poecilia formosa	42.00	9.00e-11	62.00
IUUC-Pab-097635	Pongo abelii	40.00	2.00e-10	60.50
IUUC-Pop-098948	Populus trichocarpa	62.96	2.00e-74	270.00
IUUC-Pca-100779	Procavia capensis	38.81	4.00e-11	62.80
IUUC-Ppe-101758	Prunus persica	67.13	1.00e-78	284.00
IUUC-Pva-102839	Pteropus vampyrus	40.00	2.00e-10	60.50
IUUC-Rno-105402	Rattus norvegicus	46.00	8.00e-12	65.10
IUUC-Smo-109649	Selaginella moellendorffii	51.82	1.00e-59	221.00
IUUC-Sit-110411	Setaria italica	71.76	2.00e-85	306.00
IUUC-Sly-111866	Solanum lycopersicum	64.81	1.00e-76	277.00
IUUC-Stu-112650	Solanum tuberosum	68.04	1.00e-75	275.00
IUUC-Sbi-114186	Sorghum bicolor	69.91	5.00e-83	299.00
IUUC-Sre-115140	Sporisorium reilianum	46.15	1.00e-08	55.10
IUUC-Ssc-116137	Sus scrofa	39.62	6.00e-10	58.90
IUUC-Tgu-117091	Taeniopygia guttata	43.64	3.00e-12	66.60
IUUC-Tru-118118	Takifugu rubripes	41.82	7.00e-12	65.90
IUUC-Tsy-119214	Tarsius syrichta	40.00	2.00e-10	60.50
IUUC-Tni-120632	Tetraodon nigroviridis	41.82	8.00e-12	65.50
IUUC-Tca-121518	Theobroma cacao	67.59	6.00e-80	288.00
IUUC-Tae-122704	Triticum aestivum	83.80	2.00e-91	326.00
IUUC-Tbe-128138	Tupaia belangeri	50.00	2.00e-05	44.30
IUUC-Ttr-128194	Tursiops truncatus	43.64	5.00e-12	65.90
IUUC-Uma-129425	Ustilago maydis	34.94	3.00e-07	50.40
IUUC-Vpa-130595	Vicugna pacos	40.00	2.00e-10	60.50
IUUC-Vvi-131614	Vitis vinifera	66.67	2.00e-78	284.00
IUUC-Xtr-132307	Xenopus tropicalis	40.00	4.00e-11	63.20
IUUC-Xma-134037	Xiphophorus maculatus	42.00	9.00e-11	62.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence