iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000330

Ensembl Protein ID

EMT05393

UniProt Accession

M8BF87; M8BF87_AEGTA

Genbank Protein ID

EMT05393.1

Protein Name

E3 ubiquitin-protein ligase rnf12-B

Genbank Nucleotide ID

KD587341

Gene Name

F775_05414

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_05414	EMT05393	EMT05393

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	29.7	87	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cledf    k+ ++ +pC H fh+ C+  w       + + rCP+Cr
   Q: 87   CAVCLEDFveggKK-LRRMPCYHSFHQRCIFDW------LCFNRRCPVCR 129
           ********777555.999***************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MDSVDQDRLL DEAMIETRRR WGWSQEQIDE FQRERARDRE ALRQELAAEL RERESMEYER 60
RHRDRASGPA MLDLFVPAVG ETREQTCAVC LEDFVEGGKK LRRMPCYHSF HQRCIFDWLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCTG TAGATCAAGA TCGTCTCCTA GACGAGGCTA TGATTGAAAC GAGAAGAAGG 60
TGGGGGTGGA GCCAGGAACA AATTGACGAG TTTCAGAGGG AAAGGGCAAG AGATCGAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0436--Ligase

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_05414

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007427	Arabidopsis thaliana	44.44	3.00e-12	64.70
IUUC-Bdi-015023	Brachypodium distachyon	50.00	8.00e-29	119.00
IUUC-Hvu-047742	Hordeum vulgare	60.23	2.00e-23	102.00
IUUC-Lpe-050797	Leersia perrieri	60.27	1.00e-23	101.00
IUUC-Oba-075022	Oryza barthii	56.76	8.00e-20	87.80
IUUC-Ogu-078095	Oryza glumaepatula	55.41	2.00e-19	87.80
IUUC-Oin-079826	Oryza indica	56.76	6.00e-20	89.40
IUUC-Olo-081057	Oryza longistaminata	66.20	2.00e-22	99.40
IUUC-Ome-081336	Oryza meridionalis	55.41	1.00e-19	88.60
IUUC-Oni-083013	Oryza nivara	55.43	3.00e-23	100.00
IUUC-Opu-083180	Oryza punctata	59.30	9.00e-23	100.00
IUUC-Oru-084752	Oryza rufipogon	55.43	2.00e-23	100.00
IUUC-Osa-085531	Oryza sativa	55.43	2.00e-23	100.00
IUUC-Tae-124375	Triticum aestivum	99.41	3.00e-81	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence