iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100090

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

F-box family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_560962; POPTR_0006s10610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s10610	POPTR_0006s10610.1	POPTR_0006s10610.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	32.43	2.00e-29	129.00	IUUC-Hsa-046452

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKIQKTSQTN ANNFFDLLSE EIIFTILDFT NTNPFDRKSF SLVCKSFYIT ESKHRKNLKP 60
LRQEHLPRIL NRYPNVNHLD LSLCLRLNNS SLTVISNICK DSLNSIDLSR SRSFSYNGLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAACCCAAA GATCACAGCT TTTTAAGCTT CAAAATCTCT TACCATGAAG ATACAAAAAA 60
CCTCACAAAC GAACGCCAAC AACTTCTTCG ATCTCTTGTC TGAAGAGATT ATTTTTACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF13516--LRR_6

SMART

SM00367--LRR_CC

KEGG

pop:POPTR_0006s10610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001591	Ailuropoda melanoleuca	31.42	8.00e-34	137.00
IUUC-Atr-002749	Amborella trichopoda	31.90	2.00e-47	182.00
IUUC-Apl-004140	Anas platyrhynchos	33.83	4.00e-35	142.00
IUUC-Aly-006077	Arabidopsis lyrata	31.88	1.00e-43	170.00
IUUC-Bta-012431	Bos taurus	30.07	7.00e-33	134.00
IUUC-Bdi-014086	Brachypodium distachyon	55.39	2.00e-163	568.00
IUUC-Cja-019691	Callithrix jacchus	30.07	7.00e-33	134.00
IUUC-Cfa-020668	Canis familiaris	31.76	3.00e-34	138.00
IUUC-Cpo-021658	Cavia porcellus	30.07	7.00e-33	134.00
IUUC-Csa-023598	Chlorocebus sabaeus	32.09	2.00e-34	139.00
IUUC-Cho-024787	Choloepus hoffmanni	32.20	8.00e-34	137.00
IUUC-Dno-030049	Dasypus novemcinctus	32.09	3.00e-34	139.00
IUUC-Dse-031403	Dothistroma septosporum	26.84	5.00e-23	102.00
IUUC-Eca-033723	Equus caballus	31.76	6.00e-34	137.00
IUUC-Eeu-034930	Erinaceus europaeus	33.18	1.00e-24	107.00
IUUC-Fca-035670	Felis catus	31.42	7.00e-34	137.00
IUUC-Fal-037377	Ficedula albicollis	33.20	2.00e-34	139.00
IUUC-Gmo-039470	Gadus morhua	30.98	1.00e-32	133.00
IUUC-Gga-040836	Gallus gallus	32.82	3.00e-33	135.00
IUUC-Gac-041522	Gasterosteus aculeatus	29.07	1.00e-32	133.00
IUUC-Gma-043454	Glycine max	30.35	2.00e-47	183.00
IUUC-Ggo-044534	Gorilla gorilla	31.76	4.00e-34	138.00
IUUC-Hsa-046452	Homo sapiens	31.76	4.00e-34	138.00
IUUC-Hvu-047491	Hordeum vulgare	55.99	2.00e-151	528.00
IUUC-Itr-048431	Ictidomys tridecemlineatus	30.07	9.00e-33	134.00
IUUC-Lch-050194	Latimeria chalumnae	30.50	2.00e-30	125.00
IUUC-Lpe-051447	Leersia perrieri	55.79	8.00e-151	526.00
IUUC-Laf-054025	Loxodonta africana	30.41	3.00e-33	135.00
IUUC-Mcc-055012	Macaca mulatta	32.09	2.00e-34	139.00
IUUC-Mtr-058757	Medicago truncatula	66.27	0.00e+00	824.00
IUUC-Mvi-060464	Microbotryum violaceum	25.49	2.00e-14	74.30
IUUC-Mmr-061409	Microcebus murinus	31.76	7.00e-34	137.00
IUUC-Mmu-063281	Mus musculus	30.61	2.00e-36	145.00
IUUC-Mac-064776	Musa acuminata	31.53	2.00e-27	116.00
IUUC-Mpu-065900	Mustela putorius furo	31.76	4.00e-34	138.00
IUUC-Mlu-067809	Myotis lucifugus	32.09	1.00e-34	140.00
IUUC-Nle-069953	Nomascus leucogenys	31.76	4.00e-34	138.00
IUUC-Ont-071380	Oreochromis niloticus	29.15	1.00e-33	136.00
IUUC-Oan-072994	Ornithorhynchus anatinus	31.86	5.00e-34	137.00
IUUC-Ocu-073864	Oryctolagus cuniculus	30.07	7.00e-33	134.00
IUUC-Oba-075770	Oryza barthii	54.00	1.00e-171	596.00
IUUC-Obr-076309	Oryza brachyantha	56.22	2.00e-146	512.00
IUUC-Ogl-077750	Oryza glaberrima	53.85	2.00e-169	588.00
IUUC-Ogu-078348	Oryza glumaepatula	53.85	2.00e-159	555.00
IUUC-Oin-079425	Oryza indica	53.85	3.00e-159	555.00
IUUC-Olo-080891	Oryza longistaminata	30.46	2.00e-44	172.00
IUUC-Ome-082010	Oryza meridionalis	54.68	2.00e-165	576.00
IUUC-Oni-083116	Oryza nivara	56.02	3.00e-146	511.00
IUUC-Opu-083924	Oryza punctata	55.92	1.00e-151	529.00
IUUC-Oru-084612	Oryza rufipogon	53.72	1.00e-142	499.00
IUUC-Osa-085630	Oryza sativa	53.23	4.00e-168	584.00
IUUC-Olu-087656	Ostreococcus lucimarinus	25.85	7.00e-06	44.30
IUUC-Oga-088914	Otolemur garnettii	31.76	1.00e-33	136.00
IUUC-Oar-089707	Ovis aries	30.07	5.00e-33	135.00
IUUC-Ptr-090892	Pan troglodytes	31.76	4.00e-34	138.00
IUUC-Pan-092497	Papio anubis	32.09	2.00e-34	139.00
IUUC-Psi-093859	Pelodiscus sinensis	30.41	3.00e-33	135.00
IUUC-Ppa-096002	Physcomitrella patens	42.18	2.00e-128	452.00
IUUC-Pfo-097333	Poecilia formosa	31.08	1.00e-33	136.00
IUUC-Pab-097772	Pongo abelii	31.76	4.00e-34	138.00
IUUC-Pva-102623	Pteropus vampyrus	31.76	9.00e-34	137.00
IUUC-Rno-105398	Rattus norvegicus	30.61	4.00e-36	144.00
IUUC-Smo-109569	Selaginella moellendorffii	43.52	5.00e-136	477.00
IUUC-Sit-110494	Setaria italica	57.48	3.00e-156	544.00
IUUC-Sly-111591	Solanum lycopersicum	73.64	0.00e+00	915.00
IUUC-Stu-112488	Solanum tuberosum	73.19	0.00e+00	889.00
IUUC-Sar-113053	Sorex araneus	30.07	6.00e-33	134.00
IUUC-Sbi-114065	Sorghum bicolor	31.81	3.00e-47	182.00
IUUC-Sre-115053	Sporisorium reilianum	23.44	5.00e-20	92.80
IUUC-Ssc-115902	Sus scrofa	30.07	7.00e-33	134.00
IUUC-Tni-120555	Tetraodon nigroviridis	31.08	7.00e-35	140.00
IUUC-Tae-123374	Triticum aestivum	52.29	9.00e-173	599.00
IUUC-Tur-126305	Triticum urartu	55.96	9.00e-155	539.00
IUUC-Tbe-128062	Tupaia belangeri	30.07	2.00e-29	122.00
IUUC-Ttr-128324	Tursiops truncatus	30.07	7.00e-33	134.00
IUUC-Xma-133204	Xiphophorus maculatus	31.08	1.00e-33	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence