iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114003

UUCD1 version

UUC-SoB-01247

Ensembl Protein ID

Sb08g020130.1

UniProt Accession

A0A1B6PDY5; A0A1B6PDY5_SORBI

Genbank Protein ID

KXG23876.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G152100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g020130	Sb08g020130.1	Sb08g020130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-08	33.7	191	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   d+++ lp C H+fhadC+  w       + +++CPlCr
   Q: 191  CAVCLLEFadGDELRALPlCAHAFHADCIDVW------LRAHASCPLCR 233
           ********6644499*****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRRRRRPSTA TPAPAPSAAS VSSPPSPYPA AFASLGPAPS PGPGPGPGPG PAPAPEPSAA 60
AFVGGRRGGG GAGSSLSPPL IAMLAVVGAA LLVVLYARLV SRVFRAARRR WRRRRRLRLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGCGGC GGCGGCGGCC GTCCACTGCT ACCCCGGCGC CTGCTCCGTC CGCCGCCTCC 60
GTCAGCTCAC CGCCTTCTCC CTACCCGGCG GCATTCGCGT CGCTGGGTCC AGCTCCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	40.56	1.00e-31	129.00
IUUC-Aly-005738	Arabidopsis lyrata	34.05	6.00e-26	110.00
IUUC-Ath-006761	Arabidopsis thaliana	33.12	1.00e-26	113.00
IUUC-Bdi-014398	Brachypodium distachyon	57.06	7.00e-59	220.00
IUUC-Bol-015284	Brassica oleracea	37.14	3.00e-28	118.00
IUUC-Bra-017477	Brassica rapa	37.20	4.00e-29	121.00
IUUC-Gma-044120	Glycine max	39.42	6.00e-38	150.00
IUUC-Lpe-051662	Leersia perrieri	56.64	8.00e-58	216.00
IUUC-Mtr-058344	Medicago truncatula	38.68	1.00e-36	145.00
IUUC-Ogu-077985	Oryza glumaepatula	60.29	9.00e-63	233.00
IUUC-Oin-079093	Oryza indica	62.04	8.00e-54	203.00
IUUC-Opu-083940	Oryza punctata	65.12	4.00e-68	251.00
IUUC-Oru-084986	Oryza rufipogon	59.26	7.00e-46	177.00
IUUC-Pop-099495	Populus trichocarpa	40.24	8.00e-42	163.00
IUUC-Ppe-101726	Prunus persica	39.33	3.00e-41	161.00
IUUC-Sit-109801	Setaria italica	67.07	2.00e-76	278.00
IUUC-Sly-111253	Solanum lycopersicum	40.24	5.00e-37	147.00
IUUC-Stu-112012	Solanum tuberosum	40.65	1.00e-36	146.00
IUUC-Tca-120931	Theobroma cacao	38.78	3.00e-45	174.00
IUUC-Tae-123501	Triticum aestivum	61.96	1.00e-58	219.00
IUUC-Vvi-131492	Vitis vinifera	40.00	1.00e-43	169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence