iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s15210	POPTR_0014s15210.2	POPTR_0014s15210.2
POPTR_0014s15210	POPTR_0014s15210.3	POPTR_0014s15210.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/ATG8	5.70e-48	162.5	15	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/ATG8

   S: 2    rkeevekirdkfpdkiPvivekakkekipeldkkkylvPsdltvgqlvkiirkrlqlraedalfllvnnslvsvsatlaeiyeeekdedgf 92
           r++e+++ir+k+pd+iPvive+a+k+++p++dkkkylvP+dltvgq+v+++rkr++l +e+a+f++v n l++++a++++iyee+kdedgf
   Q: 15   RQAEAARIREKYPDRIPVIVERAEKSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGF 105
           899**************************************************************************************** PP
   S: 93   lyvayaseetfG 104
           ly++y++e+tfG
   Q: 106  LYMSYSGENTFG 117
           ***********9 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAKSSFKMEH PLERRQAEAA RIREKYPDRI PVIVERAEKS DVPDIDKKKY LVPADLTVGQ 60
FVYVVRKRIK LSPEKAIFIF VKNILPPTAA MMSAIYEENK DEDGFLYMSY SGENTFGVY 119

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCCTATT ATTATTACTA TTATTTCCCC TTCTTTTTCT CTCCCTCCCT CCCTCCCTTC 60
CTTCCTTCCG TCGGGATCCG AATTCTGATT TCTTCTTCTC AATCTCGGTA CGTTACGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR004241--Atg8-like
IPR029071--Ubiquitin-rel_dom

Pfam

PF02991--Atg8

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0006914--P:autophagy

KEGG

pop:POPTR_0014s15210g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000059	Aegilops tauschii	87.18	1.00e-58	217.00
IUUC-Atr-002791	Amborella trichopoda	91.45	4.00e-61	225.00
IUUC-Apl-003994	Anas platyrhynchos	58.26	9.00e-39	151.00
IUUC-Aly-005987	Arabidopsis lyrata	94.12	2.00e-62	229.00
IUUC-Ath-007295	Arabidopsis thaliana	88.98	3.00e-53	199.00
IUUC-Bgr-012248	Blumeria graminis	80.00	7.00e-52	194.00
IUUC-Bta-012584	Bos taurus	58.26	8.00e-39	151.00
IUUC-Bci-013959	Botrytis cinerea	79.13	1.00e-51	194.00
IUUC-Bdi-014390	Brachypodium distachyon	91.53	1.00e-61	227.00
IUUC-Cja-019701	Callithrix jacchus	58.26	8.00e-39	151.00
IUUC-Cho-025008	Choloepus hoffmanni	54.78	4.00e-36	142.00
IUUC-Fal-037143	Ficedula albicollis	58.26	8.00e-39	151.00
IUUC-Gga-040919	Gallus gallus	58.26	8.00e-39	151.00
IUUC-Itr-048838	Ictidomys tridecemlineatus	58.26	9.00e-39	151.00
IUUC-Laf-054083	Loxodonta africana	57.26	7.00e-39	151.00
IUUC-Mcc-055410	Macaca mulatta	58.26	8.00e-39	151.00
IUUC-Mga-060108	Meleagris gallopavo	58.26	9.00e-39	151.00
IUUC-Mmr-060690	Microcebus murinus	58.26	8.00e-39	151.00
IUUC-Mac-064739	Musa acuminata	94.02	7.00e-54	201.00
IUUC-Oba-075926	Oryza barthii	89.92	3.00e-61	226.00
IUUC-Obr-076374	Oryza brachyantha	89.92	3.00e-61	226.00
IUUC-Ogl-077457	Oryza glaberrima	89.92	3.00e-61	226.00
IUUC-Ogu-078078	Oryza glumaepatula	89.92	3.00e-61	226.00
IUUC-Oin-079771	Oryza indica	89.92	3.00e-61	226.00
IUUC-Olo-080412	Oryza longistaminata	89.92	3.00e-61	226.00
IUUC-Ome-081791	Oryza meridionalis	89.92	3.00e-61	226.00
IUUC-Oni-082774	Oryza nivara	89.92	3.00e-61	226.00
IUUC-Osa-085439	Oryza sativa	89.92	3.00e-61	226.00
IUUC-Oar-089396	Ovis aries	57.26	2.00e-38	150.00
IUUC-Psi-093055	Pelodiscus sinensis	58.26	8.00e-39	151.00
IUUC-Pva-103103	Pteropus vampyrus	58.26	8.00e-39	151.00
IUUC-Sha-106802	Sarcophilus harrisii	58.26	1.00e-38	151.00
IUUC-Ssl-108578	Sclerotinia sclerotiorum	79.13	8.00e-52	194.00
IUUC-Sbi-114346	Sorghum bicolor	89.92	3.00e-61	226.00
IUUC-Tsy-118919	Tarsius syrichta	58.26	8.00e-39	151.00
IUUC-Tae-123593	Triticum aestivum	90.68	2.00e-60	223.00
IUUC-Tur-126158	Triticum urartu	86.32	1.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence