iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__1541__AT5G56340.1	fgenesh2_kg.8__1541__AT5G56340.1	fgenesh2_kg.8__1541__AT5G56340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.2	257	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df++g   + lpC+H fh  C+  w         + +CP+Cr
   Q: 257  CSVCLDDFEKGteAKELPCKHKFHIRCIVPW------LELHSSCPVCR 298
           ********77733566***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEETMASRYW CHMCSQMVNP IMESEIKCPF CQSGFIEEMS GNSGGGGGRG IRDVQDSETD 60
FGTDRALSLW APILLGMMSS PRRRRRFRRS EFGEENDDNG DELSNADGND NNNNSNVYYH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTGTTTCC TTCCACTCTT TCTTCTTCAT TTCCTCGTTC TTTCTTTCTT CTCCATTTTT 60
TCTCATATCC TTGGACAAAA AAATTGAGCC TTTTTCTGGG TTTTATTTTC TATAAAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_495725

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000247	Aegilops tauschii	37.50	3.00e-47	182.00
IUUC-Ath-006738	Arabidopsis thaliana	89.39	3.00e-162	563.00
IUUC-Ago-007829	Ashbya gossypii	43.55	4.00e-10	58.20
IUUC-Bdi-014762	Brachypodium distachyon	59.69	1.00e-31	130.00
IUUC-Bol-016413	Brassica oleracea	77.19	9.00e-118	417.00
IUUC-Bra-016653	Brassica rapa	75.63	3.00e-124	437.00
IUUC-Gma-044146	Glycine max	55.53	9.00e-92	329.00
IUUC-Hvu-047180	Hordeum vulgare	62.62	3.00e-38	151.00
IUUC-Lpe-051411	Leersia perrieri	64.06	3.00e-44	171.00
IUUC-Mtr-058295	Medicago truncatula	58.33	2.00e-94	338.00
IUUC-Oba-075441	Oryza barthii	65.87	3.00e-44	171.00
IUUC-Obr-076715	Oryza brachyantha	64.34	2.00e-46	178.00
IUUC-Ogl-077359	Oryza glaberrima	65.87	3.00e-44	171.00
IUUC-Ogu-078243	Oryza glumaepatula	65.08	8.00e-44	170.00
IUUC-Oin-079349	Oryza indica	66.67	7.00e-45	173.00
IUUC-Oni-082403	Oryza nivara	65.87	3.00e-44	171.00
IUUC-Oru-085092	Oryza rufipogon	65.87	6.00e-44	170.00
IUUC-Osa-085947	Oryza sativa	66.67	7.00e-45	173.00
IUUC-Pop-099555	Populus trichocarpa	55.83	3.00e-85	308.00
IUUC-Ppe-101941	Prunus persica	56.99	8.00e-89	319.00
IUUC-Sit-110378	Setaria italica	51.09	5.00e-31	127.00
IUUC-Sly-110912	Solanum lycopersicum	61.14	2.00e-63	235.00
IUUC-Sbi-114729	Sorghum bicolor	54.39	4.00e-46	178.00
IUUC-Tca-121112	Theobroma cacao	58.24	9.00e-88	316.00
IUUC-Tae-122764	Triticum aestivum	47.37	2.00e-38	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence