iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109599

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377642

Gene Name

SELMODRAFT_42421

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_42421	EFJ12065	EFJ12065

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.50e-08	33.7	290	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e++ +  + lpC H+fh++Cl  w  l +    + +CP+Cr
   Q: 290  CAICKEPMVK-AKRLPCAHLFHLSCLRSW--LDQGLADTYSCPTCR 332
           ********88.888***************..7888999*******8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

LQSLLQSSLT IVLLANLLVN FFVVLALCMK TIFFGTLTLL ETQKVVERMI NYVLFKGLFL 60
TWVVQPEMMQ IALWLAWFAV LGFLKMFQGL ARDRLDRLNA SPTATVYAHL RVFSVLVLVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCAATCGC TGCTTCAGTC GTCTCTCACA ATCGTGCTGC TGGCCAATCT CCTCGTCAAC 60
TTCTTCGTTG TTCTAGCTCT TTGTATGAAG GTTTGAGCAC TTTTTTTTTT TCCATTGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_42421

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006193	Arabidopsis lyrata	46.22	4.00e-117	414.00
IUUC-Bdi-014169	Brachypodium distachyon	40.76	4.00e-91	327.00
IUUC-Bra-017662	Brassica rapa	45.40	5.00e-105	374.00
IUUC-Laf-053452	Loxodonta africana	30.38	3.00e-37	149.00
IUUC-Ogu-078481	Oryza glumaepatula	38.52	3.00e-64	238.00
IUUC-Ppa-095969	Physcomitrella patens	76.15	6.00e-143	499.00
IUUC-Sit-110161	Setaria italica	40.80	5.00e-105	374.00
IUUC-Sbi-113957	Sorghum bicolor	41.39	2.00e-107	381.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence