iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017569

Ensembl Protein ID

Bra032080.1-P

UniProt Accession

M4ETE9; M4ETE9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra032080	Bra032080.1	Bra032080.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.90e-71	241.0	158	464

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           +Gl+N gN+C+ N vLQcLs +++l  +lle  +k++++++     + ++l+++++ +e   + ++  +sp ++++ l ++  ++   +q+Da+E+
   Q: 158  CGLTNCGNSCFANVVLQCLSWTRPLVAYLLErGHKRECRRN-----DWCFLCEFETHLERA-NISRFPFSPMNIISRLPNIGGNLGYGRQEDAHEL 247
           7******************************7778888776.....56**********999.99999***************************** PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcL 191
           ++f++d +++ +         +e++ +       +   +  ++++li+ +F+g l+sq++c  c nvs ++e+++dl+++++g+      sl++cL
   Q: 248  MRFVIDMMQSVC--------LDEFGGE-------KVVPPRAQETTLIQYIFGGLLQSQVQCTVCSNVSDQYENMMDLTVEIHGDAV----SLEECL 324
           ************........3444444.......67899999*******************************************7....8***** PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           ++ft++e l+g+n y+c++c+++++a k+l++++ P++L++ LkRf    ++++  k+nk+++fp+++dl p+++    +   ++ Y+L+av+vH 
   Q: 325  DQFTAKEWLQGDNLYKCDRCNDYVKACKRLSIRSAPNILTVALKRF----QGGRFGKLNKRISFPETFDLGPYMSCCGGEG--SDVYKLYAVIVHL 414
           **********************************************....567889****************999855544..9***********9 PP
   S: 288  Gslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
             l+    GHY++yvk+ +g+W+++dDs+V++v+ e+vl+   + aY+l+Y r
   Q: 415  DMLNAsffGHYICYVKDFRGDWYRIDDSEVEKVELEDVLS---QRAYMLLYSR 464
           95554455********************************...9*******87 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MHQVGLTWDL NSFTQLVLTL FLLSFALLFF VKRTAAKYFE VGGGGGSDSD LRRDFMVPDA 60
SECSVCGNLT TKKCSRCKSV RYCSAECQRS DWNAGHKLKC KVVKSTTGLK ASLFGNGSAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACCAAG TTGGATTGAC CTGGGATCTC AATTCCTTCA CGCAGCTCGT CCTCACCCTC 60
TTCCTCCTCT CCTTCGCTCT CCTCTTCTTT GTCAAACGCA CGGCCGCCAA GTACTTCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	61.27	4.00e-141	495.00
IUUC-Aly-005942	Arabidopsis lyrata	80.77	0.00e+00	960.00
IUUC-Ath-007334	Arabidopsis thaliana	79.97	0.00e+00	995.00
IUUC-Bdi-014660	Brachypodium distachyon	58.64	8.00e-152	531.00
IUUC-Bol-015083	Brassica oleracea	92.71	0.00e+00	1157.00
IUUC-Gma-042958	Glycine max	62.97	0.00e+00	639.00
IUUC-Hvu-047620	Hordeum vulgare	60.54	2.00e-156	546.00
IUUC-Lpe-051385	Leersia perrieri	57.32	4.00e-131	462.00
IUUC-Mtr-057748	Medicago truncatula	62.14	0.00e+00	647.00
IUUC-Mac-065204	Musa acuminata	63.21	4.00e-163	567.00
IUUC-Oba-075131	Oryza barthii	64.05	2.00e-148	519.00
IUUC-Obr-076763	Oryza brachyantha	63.08	3.00e-159	555.00
IUUC-Ogl-077264	Oryza glaberrima	63.90	2.00e-159	556.00
IUUC-Ogu-078646	Oryza glumaepatula	63.90	1.00e-159	557.00
IUUC-Oin-079613	Oryza indica	60.47	3.00e-149	522.00
IUUC-Olo-080250	Oryza longistaminata	63.68	9.00e-160	557.00
IUUC-Ome-081416	Oryza meridionalis	63.90	1.00e-159	556.00
IUUC-Oni-082102	Oryza nivara	63.66	2.00e-158	553.00
IUUC-Opu-083135	Oryza punctata	63.42	1.00e-158	553.00
IUUC-Oru-084644	Oryza rufipogon	63.90	2.00e-159	556.00
IUUC-Osa-086195	Oryza sativa	63.52	7.00e-150	524.00
IUUC-Pop-099232	Populus trichocarpa	64.03	0.00e+00	662.00
IUUC-Ppe-101845	Prunus persica	66.08	3.00e-169	587.00
IUUC-Smo-109625	Selaginella moellendorffii	55.38	2.00e-143	502.00
IUUC-Sit-109798	Setaria italica	64.24	2.00e-163	570.00
IUUC-Sly-111333	Solanum lycopersicum	63.07	0.00e+00	658.00
IUUC-Stu-112696	Solanum tuberosum	64.93	3.00e-124	437.00
IUUC-Sbi-113982	Sorghum bicolor	62.85	1.00e-161	563.00
IUUC-Tca-121521	Theobroma cacao	56.58	0.00e+00	678.00
IUUC-Tae-125546	Triticum aestivum	61.15	1.00e-156	546.00
IUUC-Tur-126423	Triticum urartu	61.01	4.00e-141	495.00
IUUC-Vvi-130927	Vitis vinifera	70.56	0.00e+00	644.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence