iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099611

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_912526; POPTR_0018s03350g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s03350	POPTR_0018s03350.1	POPTR_0018s03350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-76	259.0	181	486

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
           +Gl N gN+C+ N vLQcL+ +++l  +lle  ++ +++++     + ++l+++q+ +e   +++   +sp ++l+ l+++  ++   +q+
   Q: 181  CGLLNCGNSCFANVVLQCLTYTRPLVAYLLEkGHQTECKHN-----DWCFLCEFQSHVERA-SQSALPFSPMNILSRLRNIGGNLGYGRQE 265
           7******************************4455566555.....67**********999.99999************************ PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
           Da+Ef++f +d++++ +         +e++ +       +  ++ ++++++i+++F+g+l+sq++c +c+++s+++e+++dl+++++g+ e
   Q: 266  DAHEFMRFAIDTMQSVC--------LDEFGGE-------KAVEPASQETTIIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAE 341
           *****************........3344444.......789999*********************************************7 PP
   S: 182  tkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekq 272
               sl++cL++ft +e l+gen+y+c+ c+++++a k+l++++ P+vL++ LkRf    + ++  k+nk+v+fp++Ldlsp+++++ ++ 
   Q: 342  ----SLEECLNQFTDKEWLHGENMYKCDGCNDYVKAWKRLTIQRAPNVLTIALKRF----QSGRFGKLNKRVTFPETLDLSPYMSEKGDG- 423
           ....8***************************************************....346668********************7776. PP
   S: 273  kekkkYeLiavvvHsGslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
              + Y+L+avvvH   l+    GHY++y k+ +g+W ++dDskV++v+ +evl+   + aY+l+Y r
   Q: 424  --ADVYKLYAVVVHVDMLNAsffGHYICYTKDFHGNWHRIDDSKVSSVELDEVLS---QGAYMLLYSR 486
           ..79**********995554455********************************...********87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHVGGITVDL NWLLQFIFTV FIIGLGLLHL VKNTASKYFE VDANFEAAES NHTVIDPSIV 60
NQAMEAEEDS LRCVNCGILG SKTCSRCKSV RYCSQGCQEA HWKAGHKLQC KDFKANSSQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACACGGA ACTCCAAATA CAAAAGGAAA CACACCCTTT CTCTCCTCTC AAAATACCCA 60
TTTTCCATGT AAAAAATAAA AAATAAAGAA AAAAAATTCA TCGATTAATG CATGCAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0018s03350g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	67.29	2.00e-150	526.00
IUUC-Bdi-014660	Brachypodium distachyon	60.51	1.00e-160	560.00
IUUC-Gma-043664	Glycine max	53.43	0.00e+00	748.00
IUUC-Hvu-047620	Hordeum vulgare	58.76	3.00e-167	582.00
IUUC-Lpe-051385	Leersia perrieri	59.21	5.00e-144	504.00
IUUC-Mtr-057748	Medicago truncatula	69.83	0.00e+00	733.00
IUUC-Mac-065204	Musa acuminata	64.52	0.00e+00	637.00
IUUC-Oba-075131	Oryza barthii	65.69	1.00e-159	556.00
IUUC-Obr-076763	Oryza brachyantha	65.15	3.00e-171	595.00
IUUC-Ogl-077264	Oryza glaberrima	65.38	9.00e-172	597.00
IUUC-Ogu-078646	Oryza glumaepatula	65.38	5.00e-172	598.00
IUUC-Olo-080250	Oryza longistaminata	65.38	3.00e-172	598.00
IUUC-Ome-081416	Oryza meridionalis	65.38	3.00e-172	598.00
IUUC-Oni-082102	Oryza nivara	65.15	4.00e-171	595.00
IUUC-Opu-083135	Oryza punctata	65.65	1.00e-169	590.00
IUUC-Oru-084644	Oryza rufipogon	65.38	5.00e-172	597.00
IUUC-Osa-086195	Oryza sativa	65.79	2.00e-163	569.00
IUUC-Ppa-095936	Physcomitrella patens	64.17	2.00e-137	483.00
IUUC-Ppe-101845	Prunus persica	72.96	0.00e+00	702.00
IUUC-Sja-107805	Schizosaccharomyces japonicus	38.58	1.00e-58	220.00
IUUC-Spo-108119	Schizosaccharomyces pombe	40.00	1.00e-66	246.00
IUUC-Smo-109625	Selaginella moellendorffii	55.63	8.00e-145	507.00
IUUC-Sit-109798	Setaria italica	64.92	1.00e-174	607.00
IUUC-Sly-111333	Solanum lycopersicum	67.45	0.00e+00	706.00
IUUC-Stu-112696	Solanum tuberosum	62.37	1.00e-125	441.00
IUUC-Tca-121521	Theobroma cacao	57.24	0.00e+00	809.00
IUUC-Tur-126423	Triticum urartu	67.29	6.00e-151	527.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence