iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109316

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377580

Gene Name

SELMODRAFT_171601

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_171601	EFJ28139	EFJ28139

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.10e-75	254.2	114	419

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflafll 100
           +Gl N gN+CY N vLQcL+++++l+ +ll+  ++e++++     +  +++++l++ +++   +++  +sp ++l+ l+++ +++   +q+Da+Ef++  +
   Q: 114  CGLINCGNSCYANVVLQCLASTRPLAAYLLHgMHQEACQR-----EGWCFMCELEDHVQKA-FNNQMPFSPIKILSRLRSIGNSLGYGRQEDAHEFMRLAV 208
           7******************************666666655.....567**********999.677889********************************* PP
   S: 101  dqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeele 201
           d +++ +         +e          e   +  +++++li+++F+g l+sq++c +c+++s+ +e++ldls+ ++g+ e    sl+d+L++ft++e l+
   Q: 209  DCMQKIC--------LDEA-------GGETTLDARTQETTLIQHIFGGYLQSQVVCCQCQQRSNLYENMLDLSVGIQGNVE----SLEDALKQFTSPEWLD 290
           *******........2222.......233456788999****************************************997....8*************** PP
   S: 202  genkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG...slssGHYvayv 299
           g+nky c++c+++++a+k+l++++ P++L++ LkRf    ++++  kinkkv+fp+eLd+ p+++ + +   ++  Y+L+avvvH      +  GHYv+yv
   Q: 291  GDNKYRCDRCNAYVRAKKRLSVHEAPNILTIALKRF----QGGKFGKINKKVTFPEELDMVPYMSGTVD---TPPAYKLYAVVVHVDmlnASYFGHYVCYV 384
           ************************************....556678********************544...49***********985433445******* PP
   S: 300  knekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +  +g W+++dDskV+ev++ +v +   ++aY+l+Y+r
   Q: 385  RAGNGAWFKVDDSKVKEVDQIRVMS---QKAYMLLYRR 419
           *************************...9*******97 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MLANRPVCVL CRTPTATRCS LCKAVYYCTL ECQGKHWKQG HRLECPRKVV VSRDKREHAL 60
CALDGTLAKP KKVGFPPSQF PPYLGLANRE LPQILFPYRD FLKFFSCNIS KVPCGLINCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGGCGA ACCGGCCCGT GTGTGTTCTA TGCCGGACAC CTACGGCCAC GCGCTGTTCG 60
CTTTGCAAGG CAGTCTACTA CTGGTGAGTG ATGAGAATCA TGCTCTTCTT TTCCCTAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_171601

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014660	Brachypodium distachyon	53.77	3.00e-127	449.00
IUUC-Hvu-047620	Hordeum vulgare	55.58	2.00e-135	476.00
IUUC-Olu-087767	Ostreococcus lucimarinus	37.94	3.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence