iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131553

UUCD1 version

UUC-ViV-00094

Ensembl Protein ID

VIT_11s0052g00530.t01

UniProt Accession

D7SQD9; D7SQD9_VITVI

Genbank Protein ID

CBI17870.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594964

Gene Name

ATL43; VIT_11s0052g00530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_11s0052g00530	VIT_11s0052g00530.t01	VIT_11s0052g00530.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	31.9	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   + +++lp C+H+fh +C+  w         + +CPlCr
   Q: 129  CAVCLNRFepTEILRLLPkCKHAFHVECVDTW------LDAHSTCPLCR 171
           ********4422277777**************......**********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSLLGFSCLV FWLFFCVDGG VGADDVVVVA ANPSQSPPLP PPALPRPNFS PFRPSIAVIV 60
GVLTTMFSIT FLLLLYAKHC KRGNGVVYTG TPPLSSAARK NSGIDRTVIE SLPVFRFASL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTCTTC TCGGTTTCTC GTGTCTCGTC TTTTGGCTCT TCTTCTGTGT AGATGGTGGA 60
GTTGGAGCCG ATGATGTGGT GGTGGTGGCC GCTAATCCTT CGCAGTCTCC GCCACTGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003122	Amborella trichopoda	46.70	6.00e-76	277.00
IUUC-Aly-006151	Arabidopsis lyrata	50.28	6.00e-84	303.00
IUUC-Ath-007131	Arabidopsis thaliana	51.93	9.00e-80	289.00
IUUC-Bdi-014982	Brachypodium distachyon	45.24	4.00e-61	227.00
IUUC-Bol-015760	Brassica oleracea	50.54	4.00e-84	303.00
IUUC-Bra-017357	Brassica rapa	50.55	2.00e-83	301.00
IUUC-Gma-042757	Glycine max	57.04	1.00e-65	242.00
IUUC-Hvu-047245	Hordeum vulgare	41.28	1.00e-57	216.00
IUUC-Lpe-051226	Leersia perrieri	72.95	4.00e-51	194.00
IUUC-Mtr-057973	Medicago truncatula	47.84	5.00e-60	224.00
IUUC-Mac-065494	Musa acuminata	44.57	2.00e-62	232.00
IUUC-Oba-075267	Oryza barthii	67.18	1.00e-48	186.00
IUUC-Ogl-077528	Oryza glaberrima	67.18	1.00e-48	186.00
IUUC-Ogu-078754	Oryza glumaepatula	66.92	1.00e-49	189.00
IUUC-Oin-079781	Oryza indica	66.92	1.00e-49	189.00
IUUC-Ome-081863	Oryza meridionalis	66.92	1.00e-49	189.00
IUUC-Oni-082943	Oryza nivara	66.92	1.00e-49	189.00
IUUC-Opu-083466	Oryza punctata	66.92	2.00e-49	188.00
IUUC-Oru-084675	Oryza rufipogon	66.92	1.00e-49	189.00
IUUC-Osa-085804	Oryza sativa	66.92	2.00e-49	188.00
IUUC-Ppa-095281	Physcomitrella patens	60.69	1.00e-37	150.00
IUUC-Pop-099148	Populus trichocarpa	57.33	2.00e-96	345.00
IUUC-Ppe-102095	Prunus persica	55.50	3.00e-86	311.00
IUUC-Smo-108817	Selaginella moellendorffii	34.81	9.00e-23	99.80
IUUC-Sit-109970	Setaria italica	44.20	2.00e-65	242.00
IUUC-Sly-111677	Solanum lycopersicum	75.19	3.00e-54	204.00
IUUC-Stu-112327	Solanum tuberosum	78.10	1.00e-58	219.00
IUUC-Sbi-114529	Sorghum bicolor	44.73	6.00e-64	237.00
IUUC-Tae-123746	Triticum aestivum	67.74	1.00e-45	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence