iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099299

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_797835; POPTR_0001s34610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s34610	POPTR_0001s34610.1	POPTR_0001s34610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	32.3	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  kd +++lp C H+fh +C+  w         + +CPlCr
   Q: 104  CPVCLCEFseKDKLRLLPmCSHAFHINCIDTW------LLSNSTCPLCR 146
           ********88666*******************......888889****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPLPSPPSAS LISPAVLFVI VILAVLFFIS GLLHLLIRFL IKHPTSSAAS QSNRYPEISG 60
SDALQRQLQQ LFHLHDSGLD QAFIDALPVF QYKEIVGPKE PFDCPVCLCE FSEKDKLRLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCACTGC CATCACCACC ATCAGCCTCA CTGTTGCGTC TTTGCTTCGC TTTTGGTTAT 60
TTCTAATAAA TTTGGTCAGA GAGTGATTCT CGAGAAAGAG CAAGAGAGAA GCAGATGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s34610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014382	Brachypodium distachyon	52.34	4.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence