iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114837

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G080800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g007000	Sb10g007000.1	Sb10g007000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	32.9	192	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e+f   +   + lpC+H++h+dC+  w       + + +CP+Cr
   Q: 192  CPVCKEEFelgE-AARELPCKHAYHTDCIVPW------LRLHNSCPVCR 233
           ********7743.4999***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTGAAGGVR RRRRTWRLYW CYVCGRAVRA VSYPTSDVFC PRCFGRFLHE IDLPAPRPVV 60
PPADQFFQPP FLPHDGPRRW VIYTGDASAD PTADDADTPL RRRRRRVPSP PPAPATRRPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCACGG GCGCGGCGGG CGGCGTGCGA CGGCGCCGGC GGACGTGGCG CCTGTACTGG 60
TGCTACGTGT GCGGCCGCGC GGTGCGCGCC GTCTCGTACC CGACCTCGGA CGTCTTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g007000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014563	Brachypodium distachyon	55.10	2.00e-62	231.00
IUUC-Csv-025892	Ciona savignyi	36.21	3.00e-19	86.30
IUUC-Hvu-047520	Hordeum vulgare	54.06	9.00e-65	239.00
IUUC-Mla-058832	Melampsora laricipopulina	42.55	4.00e-15	73.20
IUUC-Ogl-077621	Oryza glaberrima	62.95	1.00e-63	235.00
IUUC-Ogu-078542	Oryza glumaepatula	56.83	2.00e-65	241.00
IUUC-Oin-079595	Oryza indica	55.04	1.00e-65	243.00
IUUC-Ome-081492	Oryza meridionalis	54.80	4.00e-66	243.00
IUUC-Oni-082188	Oryza nivara	54.23	2.00e-66	246.00
IUUC-Oru-084571	Oryza rufipogon	56.99	5.00e-67	246.00
IUUC-Sit-110480	Setaria italica	73.13	3.00e-97	347.00
IUUC-Tae-125158	Triticum aestivum	59.66	3.00e-61	227.00
IUUC-Zma-135464	Zea mays	71.47	1.00e-87	315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence