iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016720

Ensembl Protein ID

Bra040564.1-P

UniProt Accession

M4FHI6; M4FHI6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040564	Bra040564.1	Bra040564.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-08	35.4	120	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+++   ++  +vlp C+H fh dC+ +w       + + +CPlCr
   Q: 120  CAVCLSHLvdgDK-ARVLPgCNHGFHVDCIDMW------FQSHSTCPLCR 162
           ********77444.899999*************......9999******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDEESASNGS IFRNFEGEEM MGKVILFAIV SLFTAILFLL LLHLYARLFW WRVEHHLNLN 60
LTQPDTPGST VIGRNNQRRR FVFAQGQEVP PRNAGLDSTT LQSIPILVFK SCDFKDGLEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAAG AATCTGCTTC TAATGGCTCC ATCTTCAGAA ACTTTGAAGG AGAAGAGATG 60
ATGGGAAAAG TAATCCTTTT TGCAATCGTA TCCCTCTTTA CAGCGATTCT CTTCCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000301	Aegilops tauschii	33.97	4.00e-20	90.50
IUUC-Aly-005421	Arabidopsis lyrata	75.68	2.00e-123	434.00
IUUC-Ath-006957	Arabidopsis thaliana	71.79	1.00e-112	398.00
IUUC-Bdi-014880	Brachypodium distachyon	43.15	7.00e-28	117.00
IUUC-Bol-015888	Brassica oleracea	92.43	8.00e-139	486.00
IUUC-Gma-044235	Glycine max	41.16	3.00e-43	168.00
IUUC-Hvu-047652	Hordeum vulgare	38.55	1.00e-25	110.00
IUUC-Lpe-051092	Leersia perrieri	40.54	2.00e-20	92.80
IUUC-Mtr-058409	Medicago truncatula	48.39	9.00e-42	163.00
IUUC-Mac-065123	Musa acuminata	39.17	6.00e-35	140.00
IUUC-Oba-074984	Oryza barthii	47.32	3.00e-24	105.00
IUUC-Obr-076471	Oryza brachyantha	42.48	6.00e-22	96.70
IUUC-Ogl-077250	Oryza glaberrima	47.32	3.00e-24	105.00
IUUC-Ogu-078929	Oryza glumaepatula	47.32	3.00e-24	105.00
IUUC-Oin-079559	Oryza indica	47.32	3.00e-24	105.00
IUUC-Ome-081596	Oryza meridionalis	46.67	3.00e-21	95.50
IUUC-Oni-082758	Oryza nivara	48.21	4.00e-25	108.00
IUUC-Opu-083878	Oryza punctata	49.54	1.00e-23	103.00
IUUC-Oru-084427	Oryza rufipogon	47.32	3.00e-24	105.00
IUUC-Osa-086236	Oryza sativa	47.32	3.00e-24	105.00
IUUC-Pop-099297	Populus trichocarpa	49.16	1.00e-40	159.00
IUUC-Ppe-101738	Prunus persica	51.22	2.00e-37	148.00
IUUC-Sly-111311	Solanum lycopersicum	42.53	2.00e-38	152.00
IUUC-Stu-112277	Solanum tuberosum	53.96	6.00e-37	147.00
IUUC-Sbi-114427	Sorghum bicolor	41.94	5.00e-29	121.00
IUUC-Tca-121232	Theobroma cacao	45.26	1.00e-46	179.00
IUUC-Tae-122887	Triticum aestivum	40.61	5.00e-28	117.00
IUUC-Vvi-131354	Vitis vinifera	46.49	4.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence