iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105830

Ensembl Protein ID

ENSRNOP00000073556.1

UniProt Accession

A0A0G2K5U0; A0A0G2K5U0_RAT

Genbank Protein ID

ENSRNOP00000073556

Protein Name

Fanconi anemia group D2 protein homolog

Genbank Nucleotide ID

AC096599

Gene Name

Fancd2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000061085.1	ENSRNOT00000082618.1	ENSRNOP00000073556.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/CUE	4.10e-07	30.3	194	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/CUE

   S: 1    dletaleqLkeiFP.nldysviqvvLeantgsleaavnnLLeg 42
           dl+t  +qL++++P nl+++ i++++e++++s++a v+++L++
   Q: 194  DLTTQMMQLISVAPvNLQHDFITSLPEILGDSQHANVGKELSE 236
           6899*************************************97 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MVKMVSKRSR LDFEDKETLA EDASKIMKQP LSKLAKKSCG SHEVEENGSV FVRLLKASGL 60
TLKTGDNQNQ LGVDQIIFQR KLFQALRKHP SYPKVIEEFV NGLESYTEDI DSLRNCLLSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCAAAA TGGTTTCCAA AAGAAGTCGG TTAGATTTTG AGGATAAAGA AACCCTGGCA 60
GAAGATGCCT CCAGTAAGTA TCTACCCTTT CATTGTTATA TGTCAATCAC AGATGTGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029448--FANCD2

Pfam

PF14631--FancD2

Gene Ontology

GO:0000793--C:condensed chromosome
GO:0005829--C:cytosol
GO:0016604--C:nuclear body
GO:0005730--C:nucleolus
GO:0048854--P:brain morphogenesis
GO:0034599--P:cellular response to oxidative stress
GO:0006281--P:DNA repair
GO:0007276--P:gamete generation
GO:0097150--P:neuronal stem cell population maintenance
GO:2000348--P:regulation of CD40 signaling pathway
GO:0050727--P:regulation of inflammatory response
GO:0045589--P:regulation of regulatory T cell differentiation
GO:0051090--P:regulation of sequence-specific DNA binding transcription factor activity
GO:0010332--P:response to gamma radiation
GO:0007129--P:synapsis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000432	Aegilops tauschii	28.93	3.00e-64	241.00
IUUC-Aml-001335	Ailuropoda melanoleuca	75.19	0.00e+00	2090.00
IUUC-Apl-004194	Anas platyrhynchos	51.05	0.00e+00	1336.00
IUUC-Aca-004342	Anolis carolinensis	53.78	0.00e+00	1446.00
IUUC-Aly-005786	Arabidopsis lyrata	27.52	4.00e-68	253.00
IUUC-Ath-007464	Arabidopsis thaliana	28.52	4.00e-80	293.00
IUUC-Ago-007994	Ashbya gossypii	41.82	2.90e+00	28.50
IUUC-Ame-011928	Astyanax mexicanus	49.79	0.00e+00	629.00
IUUC-Bta-012694	Bos taurus	71.92	0.00e+00	1981.00
IUUC-Bdi-014978	Brachypodium distachyon	27.73	4.00e-71	263.00
IUUC-Cel-018414	Caenorhabditis elegans	24.52	6.00e-08	53.90
IUUC-Cja-018718	Callithrix jacchus	73.83	0.00e+00	2065.00
IUUC-Cfa-020099	Canis familiaris	74.51	0.00e+00	2090.00
IUUC-Cpo-022409	Cavia porcellus	72.24	0.00e+00	1945.00
IUUC-Csa-023529	Chlorocebus sabaeus	73.09	0.00e+00	2048.00
IUUC-Cho-024646	Choloepus hoffmanni	70.20	0.00e+00	816.00
IUUC-Cin-025320	Ciona intestinalis	25.56	2.00e-57	218.00
IUUC-Csv-025936	Ciona savignyi	24.36	4.00e-04	37.40
IUUC-Cme-027121	Cyanidioschyzon merolae	32.33	2.00e-13	72.00
IUUC-Dre-027518	Danio rerio	49.74	0.00e+00	1253.00
IUUC-Dno-029719	Dasypus novemcinctus	73.17	0.00e+00	2012.00
IUUC-Dme-032205	Drosophila melanogaster	22.97	7.00e-53	202.00
IUUC-Ete-032735	Echinops telfairi	55.03	0.00e+00	971.00
IUUC-Eca-033657	Equus caballus	75.77	0.00e+00	2090.00
IUUC-Eeu-035133	Erinaceus europaeus	66.04	0.00e+00	1143.00
IUUC-Fca-035880	Felis catus	69.90	0.00e+00	1920.00
IUUC-Fal-037013	Ficedula albicollis	51.14	0.00e+00	1191.00
IUUC-Gmo-039371	Gadus morhua	46.71	0.00e+00	698.00
IUUC-Gga-040720	Gallus gallus	52.45	0.00e+00	1362.00
IUUC-Gac-042331	Gasterosteus aculeatus	48.87	0.00e+00	1191.00
IUUC-Ggo-045657	Gorilla gorilla	69.18	0.00e+00	1939.00
IUUC-Hsa-046759	Homo sapiens	74.53	0.00e+00	2126.00
IUUC-Hvu-047390	Hordeum vulgare	29.02	4.00e-71	263.00
IUUC-Itr-048885	Ictidomys tridecemlineatus	74.93	0.00e+00	2145.00
IUUC-Lch-049711	Latimeria chalumnae	53.64	0.00e+00	1368.00
IUUC-Lpe-050891	Leersia perrieri	28.74	4.00e-72	266.00
IUUC-Loc-051888	Lepisosteus oculatus	49.93	0.00e+00	1261.00
IUUC-Laf-053492	Loxodonta africana	74.74	0.00e+00	2067.00
IUUC-Mcc-055632	Macaca mulatta	72.45	0.00e+00	2033.00
IUUC-Mga-059769	Meleagris gallopavo	52.41	0.00e+00	1336.00
IUUC-Mmr-061234	Microcebus murinus	75.96	0.00e+00	2132.00
IUUC-Mdo-062903	Monodelphis domestica	63.14	0.00e+00	1732.00
IUUC-Mmu-063676	Mus musculus	90.50	0.00e+00	2443.00
IUUC-Mpu-066421	Mustela putorius furo	74.62	0.00e+00	1813.00
IUUC-Mlu-067851	Myotis lucifugus	71.81	0.00e+00	2004.00
IUUC-Nle-069694	Nomascus leucogenys	71.56	0.00e+00	937.00
IUUC-Opr-071174	Ochotona princeps	65.33	0.00e+00	1117.00
IUUC-Ont-071414	Oreochromis niloticus	49.45	0.00e+00	1241.00
IUUC-Oan-072704	Ornithorhynchus anatinus	46.90	1.00e-73	269.00
IUUC-Ocu-073877	Oryctolagus cuniculus	73.17	0.00e+00	2002.00
IUUC-Obr-076418	Oryza brachyantha	27.83	3.00e-68	254.00
IUUC-Ogl-077563	Oryza glaberrima	28.16	6.00e-60	226.00
IUUC-Ogu-077998	Oryza glumaepatula	27.86	3.00e-68	254.00
IUUC-Olo-080953	Oryza longistaminata	27.99	3.00e-59	224.00
IUUC-Ome-081590	Oryza meridionalis	28.10	4.00e-66	247.00
IUUC-Opu-083761	Oryza punctata	27.55	5.00e-67	250.00
IUUC-Oru-084791	Oryza rufipogon	27.55	4.00e-67	250.00
IUUC-Osa-085771	Oryza sativa	27.55	3.00e-67	250.00
IUUC-Ola-086402	Oryzias latipes	47.72	0.00e+00	1239.00
IUUC-Oga-088325	Otolemur garnettii	71.83	0.00e+00	1965.00
IUUC-Oar-089492	Ovis aries	71.66	0.00e+00	1991.00
IUUC-Ptr-091257	Pan troglodytes	74.83	0.00e+00	2115.00
IUUC-Pan-091710	Papio anubis	76.08	0.00e+00	643.00
IUUC-Psi-093960	Pelodiscus sinensis	52.41	0.00e+00	1130.00
IUUC-Pma-094600	Petromyzon marinus	46.42	0.00e+00	1136.00
IUUC-Ppa-095666	Physcomitrella patens	27.60	2.00e-83	304.00
IUUC-Pfo-096345	Poecilia formosa	48.14	0.00e+00	1203.00
IUUC-Pab-098684	Pongo abelii	75.44	0.00e+00	2048.00
IUUC-Pca-100659	Procavia capensis	60.79	0.00e+00	1068.00
IUUC-Pva-102653	Pteropus vampyrus	71.42	0.00e+00	1991.00
IUUC-Pgr-103320	Puccinia graminis	31.37	5.10e-01	28.50
IUUC-Sha-106852	Sarcophilus harrisii	63.95	0.00e+00	1705.00
IUUC-Sit-110198	Setaria italica	28.01	2.00e-72	267.00
IUUC-Sar-113565	Sorex araneus	52.99	0.00e+00	844.00
IUUC-Ssc-116311	Sus scrofa	73.03	0.00e+00	2035.00
IUUC-Tgu-116706	Taeniopygia guttata	52.31	0.00e+00	1338.00
IUUC-Tru-118512	Takifugu rubripes	46.63	0.00e+00	1156.00
IUUC-Tni-120565	Tetraodon nigroviridis	47.20	0.00e+00	1221.00
IUUC-Tca-121195	Theobroma cacao	28.31	1.00e-80	295.00
IUUC-Tbe-127657	Tupaia belangeri	69.36	0.00e+00	1065.00
IUUC-Ttr-128431	Tursiops truncatus	71.94	0.00e+00	1966.00
IUUC-Vpa-130299	Vicugna pacos	66.02	0.00e+00	1008.00
IUUC-Vvi-131258	Vitis vinifera	27.82	1.00e-36	149.00
IUUC-Xtr-132684	Xenopus tropicalis	54.76	0.00e+00	1435.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence