iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007050

UUCD1 version

UUC-ArT-00335

Ensembl Protein ID

AT3G61550.1

UniProt Accession

Q9M313; ATL68_ARATH

Genbank Protein ID

CAB71085.1; AEE80221.1; AAL16112.1; AAM51602.1; BAD95337.1

Protein Name

RING-H2 finger protein ATL68; RING-type E3 ubiquitin transferase ATL68

Genbank Nucleotide ID

AL132962; CP002686; AF428280; AY116968; AK221661

Gene Name

ATL68; At3g61550; F2A19.150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G61550	AT3G61550.1	AT3G61550.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.7	136	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++++  ++ +p C+H fh  Cl +w       + + +CP+Cr
   Q: 136  CSICLCEYMEEemLRMMPeCKHYFHVYCLDAW------LKLNGSCPVCR 178
           *******966656888889*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSTATLVVFP PPPPVPIPTY ITSLGLGYSI AIALGFLVLI STIILSSYIC CRASRLRFSA 60
SAANANANAS FSDRGVIVPR IIFVAEDDDL ESGNVVVGGL DHSVINSYPK FHFTKDITAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAAAACGTA TAACAAGAAA ACCTAATAAA TGCAAAGCTA TTAATATTTT GCCAAACATT 60
GTATTCAATG CCGTAGCTAC ATTTCCCCAC CCACCTCCCC AAAACACCAA AAAAATAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G61550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000942	Aegilops tauschii	76.32	2.00e-25	105.00
IUUC-Atr-002663	Amborella trichopoda	53.46	9.00e-32	128.00
IUUC-Aly-005626	Arabidopsis lyrata	95.88	2.00e-85	307.00
IUUC-Bdi-015029	Brachypodium distachyon	51.70	4.00e-28	116.00
IUUC-Bol-015802	Brassica oleracea	76.00	1.00e-68	251.00
IUUC-Bra-017359	Brassica rapa	75.62	1.00e-61	228.00
IUUC-Hvu-047604	Hordeum vulgare	48.73	1.00e-37	148.00
IUUC-Lpe-050991	Leersia perrieri	52.41	4.00e-35	140.00
IUUC-Mtr-058250	Medicago truncatula	52.13	2.00e-24	104.00
IUUC-Mac-064920	Musa acuminata	51.20	3.00e-22	97.80
IUUC-Oba-075352	Oryza barthii	48.74	2.00e-30	124.00
IUUC-Obr-076878	Oryza brachyantha	53.85	1.00e-28	118.00
IUUC-Ogl-077080	Oryza glaberrima	48.74	2.00e-30	124.00
IUUC-Ogu-077991	Oryza glumaepatula	48.74	2.00e-30	124.00
IUUC-Oin-080020	Oryza indica	48.74	2.00e-30	124.00
IUUC-Olo-080906	Oryza longistaminata	48.74	2.00e-30	124.00
IUUC-Ome-081299	Oryza meridionalis	48.74	2.00e-30	124.00
IUUC-Oni-082889	Oryza nivara	48.74	3.00e-30	124.00
IUUC-Opu-084024	Oryza punctata	48.74	1.00e-30	125.00
IUUC-Oru-084432	Oryza rufipogon	48.74	3.00e-30	124.00
IUUC-Osa-085873	Oryza sativa	48.74	3.00e-30	124.00
IUUC-Pop-099130	Populus trichocarpa	63.27	6.00e-46	176.00
IUUC-Ppe-101378	Prunus persica	55.08	5.00e-24	103.00
IUUC-Sit-110496	Setaria italica	49.52	2.00e-31	129.00
IUUC-Sly-111309	Solanum lycopersicum	57.44	9.00e-38	149.00
IUUC-Stu-112524	Solanum tuberosum	57.44	1.00e-37	149.00
IUUC-Sbi-113964	Sorghum bicolor	48.76	4.00e-40	156.00
IUUC-Tae-125019	Triticum aestivum	50.00	4.00e-33	133.00
IUUC-Tur-126402	Triticum urartu	49.74	2.00e-32	132.00
IUUC-Vvi-130869	Vitis vinifera	57.89	1.00e-41	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence