iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099882

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-SPECIFIC PROTEASE 15 family protein

Genbank Nucleotide ID

CM000347

Gene Name

XM_002317328.1; POPTR_0011s09750g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s09750	POPTR_0011s09750.1	POPTR_0011s09750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.20e-77	261.1	382	686

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqD 91
           Gl N gN+CY N+vLQcL+ +++l  +ll+ ++++++      e + +l+++l++ +  l  +  +  sp+++l +++++++++   +q+D
   Q: 382  GLVNCGNSCYANAVLQCLTCTKPLIVFLLHrSHSRAC-----CEIDWCLMCELEQHVMML-RECGGPLSPSRILLHMRNINHQIGDGSQED 466
           9*****************************3333444.....46788**********766.99**************************** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeet 182
           a+Efl+ l+ ++++ +        e        +l  e + ++  +++++i+++F+g+l+s++kcl+c+++s+r+e+ +dl+l++ g  + 
   Q: 467  AHEFLRLLIASMQSIC-------LE--------KLGGEDKVDPRLQETTFIQHTFGGRLRSKVKCLRCHHESERYENIMDLTLEIFGWVK- 541
           ****************.......22........3344457889999*****************************************997. PP
   S: 183  kkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqk 273
              sl+d+L +ft++eel+gen+y c +c ++++a+k+l++++ P++L++ LkRf    ++++  kink+++fp++Ld+ pf+t +  ++ 
   Q: 542  ---SLEDALTQFTTPEELDGENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRF----QEGKYGKINKCITFPDMLDMIPFMTGTG-DV- 623
           ...8***************************************************....446778********************44.33. PP
   S: 274  ekkkYeLiavvvHsGsls...sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
            +  Y L+avvvH  +l+   sGHYvayvk+ +g+W+++dD++V++v++++v     + aY+lfY+r
   Q: 624  -PPLYMLYAVVVHLDTLNasfSGHYVAYVKDLQGSWFRIDDTEVHPVSMSQVML---EGAYILFYTR 686
           .9***********997664458********************************...9*******98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLEPRGADIP VLFLVLVVLP LVAYILLGKW SESAKKRERI SLLAQLAAEE AFRAEVMATA 60
CIIPPMSTSK NGIHVCARCF SPATTRCSRC KSVRYCSGKC QIIHWRQAHK EECQRLETTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGAAC CAAGGGGAGC TGATATACCT GTCCTGTTTC TTGTCTTGGT CGTGCTTCCT 60
CTGGTTGCTT ACATTTTGCT TGGGAAATGG AGTGAGTCTG CAAAGAAGAG AGAGAGGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0011s09750g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003062	Amborella trichopoda	59.68	1.00e-163	569.00
IUUC-Aly-006034	Arabidopsis lyrata	51.81	0.00e+00	777.00
IUUC-Ath-007599	Arabidopsis thaliana	53.05	0.00e+00	764.00
IUUC-Bdi-014717	Brachypodium distachyon	59.88	4.00e-161	561.00
IUUC-Bol-015616	Brassica oleracea	53.77	0.00e+00	789.00
IUUC-Gma-043603	Glycine max	67.59	0.00e+00	766.00
IUUC-Lpe-051615	Leersia perrieri	58.56	6.00e-158	551.00
IUUC-Mtr-058164	Medicago truncatula	56.41	0.00e+00	853.00
IUUC-Mac-065271	Musa acuminata	69.59	2.00e-165	575.00
IUUC-Oba-075960	Oryza barthii	57.43	1.00e-161	563.00
IUUC-Obr-076330	Oryza brachyantha	60.35	1.00e-167	583.00
IUUC-Ogl-077370	Oryza glaberrima	61.07	9.00e-167	580.00
IUUC-Ogu-078615	Oryza glumaepatula	57.43	1.00e-161	563.00
IUUC-Oin-079409	Oryza indica	61.07	4.00e-167	581.00
IUUC-Olo-080550	Oryza longistaminata	57.25	4.00e-161	561.00
IUUC-Ome-081508	Oryza meridionalis	57.62	7.00e-162	564.00
IUUC-Oni-082740	Oryza nivara	57.43	9.00e-162	563.00
IUUC-Opu-083669	Oryza punctata	52.07	3.00e-141	495.00
IUUC-Oru-084502	Oryza rufipogon	57.43	9.00e-162	563.00
IUUC-Osa-085475	Oryza sativa	61.07	1.00e-166	580.00
IUUC-Ppe-101942	Prunus persica	62.12	0.00e+00	978.00
IUUC-Sit-109825	Setaria italica	60.12	4.00e-167	581.00
IUUC-Sly-111027	Solanum lycopersicum	69.55	0.00e+00	757.00
IUUC-Tca-121618	Theobroma cacao	67.76	0.00e+00	832.00
IUUC-Tae-123144	Triticum aestivum	67.05	2.00e-148	518.00
IUUC-Vvi-131600	Vitis vinifera	66.40	0.00e+00	800.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence