iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058493

Ensembl Protein ID

KEH35359

UniProt Accession

A0A072V042; A0A072V042_MEDTR

Genbank Protein ID

KEH35359.1

Protein Name

PHD-finger protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g088665

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g088665	KEH35359	KEH35359

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-16	62.2	685	731

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C vC   ++d+  +v C+ C++++H  C+k++  ++ p+ + w+C+kC+
   Q: 685  ICQVCLTDQDDS-RIVLCDGCDHAYHIYCMKPP-LDSIPQGK-WFCRKCD 731
           6*****999977.6*******************.*******7.******7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

METDEEGMEN SDNTECVEGV RCLKRKAIDD GLPISNGNGV VEESRHSESE ALNDLAMFAN 60
GSSVADVAEV LKSLKNGLNG NCVAEEARES AEVLKSLSNG VNGNCVAEEA RESISEAVND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAAATATG AATAAGTTGA AAATAAGTTG AAATAGGCGT CAGCGTCGGT TCCAAAACAA 60
CAACAACTCA GATAAGACTA GCTTTGGCGT AGCAGCGCCA CCACACTCAG GCAAGTCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g088665

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000089	Aegilops tauschii	30.18	6.00e-49	188.00
IUUC-Atr-003036	Amborella trichopoda	31.18	2.00e-46	180.00
IUUC-Aly-005677	Arabidopsis lyrata	41.65	9.00e-85	308.00
IUUC-Ath-007282	Arabidopsis thaliana	40.94	7.00e-85	307.00
IUUC-Bdi-014741	Brachypodium distachyon	29.55	1.00e-52	200.00
IUUC-Bol-016121	Brassica oleracea	37.85	1.00e-76	279.00
IUUC-Bra-018006	Brassica rapa	41.82	2.00e-72	266.00
IUUC-Cin-025168	Ciona intestinalis	39.25	1.00e-13	69.70
IUUC-Gma-044138	Glycine max	61.82	0.00e+00	734.00
IUUC-Hvu-047708	Hordeum vulgare	30.24	2.00e-54	206.00
IUUC-Lpe-051590	Leersia perrieri	32.71	1.00e-50	194.00
IUUC-Mac-065361	Musa acuminata	33.67	1.00e-55	209.00
IUUC-Oba-075978	Oryza barthii	30.00	1.00e-54	206.00
IUUC-Obr-076162	Oryza brachyantha	32.35	2.00e-56	213.00
IUUC-Ogl-077688	Oryza glaberrima	28.98	9.00e-36	143.00
IUUC-Ogu-078286	Oryza glumaepatula	30.19	4.00e-55	208.00
IUUC-Oin-079536	Oryza indica	30.19	9.00e-55	207.00
IUUC-Olo-081087	Oryza longistaminata	30.80	6.00e-56	211.00
IUUC-Ome-081892	Oryza meridionalis	32.11	2.00e-53	203.00
IUUC-Oni-082124	Oryza nivara	30.19	4.00e-55	208.00
IUUC-Opu-084017	Oryza punctata	32.43	2.00e-54	206.00
IUUC-Oru-084542	Oryza rufipogon	29.81	5.00e-55	208.00
IUUC-Osa-086025	Oryza sativa	29.81	5.00e-55	208.00
IUUC-Psi-092932	Pelodiscus sinensis	53.33	3.00e-12	67.80
IUUC-Pop-099385	Populus trichocarpa	43.11	1.00e-126	446.00
IUUC-Ppe-101709	Prunus persica	44.09	1.00e-133	469.00
IUUC-Sit-110064	Setaria italica	31.50	6.00e-61	228.00
IUUC-Sly-111296	Solanum lycopersicum	44.42	2.00e-114	405.00
IUUC-Stu-112523	Solanum tuberosum	50.74	2.00e-77	281.00
IUUC-Sbi-113816	Sorghum bicolor	30.47	6.00e-55	209.00
IUUC-Tca-120988	Theobroma cacao	48.98	4.00e-140	491.00
IUUC-Tae-125487	Triticum aestivum	30.74	1.00e-54	207.00
IUUC-Tur-126151	Triticum urartu	27.77	4.00e-47	182.00
IUUC-Vvi-130984	Vitis vinifera	43.53	2.00e-128	452.00
IUUC-Zma-135753	Zea mays	31.14	1.00e-64	240.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence