iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058033

Ensembl Protein ID

KEH18799

UniProt Accession

A0A072TMT1; A0A072TMT1_MEDTR

Genbank Protein ID

KEH18799.1

Protein Name

RING zinc finger protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g028580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g028580	KEH18799	KEH18799

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-06	28.2	12	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkw.pglknssskefrCPlCr 46
           C+iC+e++    +d  +v  CgHvfh+ Clq+w  + k  + k+ +CP+C+
   Q: 12   CSICYEPLnpvnEDLQCVSICGHVFHELCLQQWfEYCK--TPKKHTCPICK 60
           ********666544244555*************55555..**********6 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVDDGEFSGT ICSICYEPLN PVNEDLQCVS ICGHVFHELC LQQWFEYCKT PKKHTCPICK 60
QGCKAKDACR LYFQSIGDVK EGVVTQKNVG LEEDSGVLRK EVKRLEGKVS GLSTVLEKQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCCAGAAA AATCACAGAA AAAAATTCAC ACCTCAATCC ATGGTCGACG ATGGCGAATT 60
CTCCGGCACC ATTTGTTCAA TCTGCTACGA ACCTCTCAAC CCCGTTAACG AAGATCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g028580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002646	Amborella trichopoda	38.86	6.00e-81	294.00
IUUC-Aly-005550	Arabidopsis lyrata	57.86	2.00e-79	288.00
IUUC-Ath-007362	Arabidopsis thaliana	57.44	2.00e-83	302.00
IUUC-Bdi-014334	Brachypodium distachyon	38.91	2.00e-47	182.00
IUUC-Bol-015839	Brassica oleracea	38.64	2.00e-15	76.30
IUUC-Bra-016703	Brassica rapa	55.78	1.00e-74	273.00
IUUC-Dre-027984	Danio rerio	24.92	2.00e-09	56.60
IUUC-Gmo-038704	Gadus morhua	23.23	2.00e-09	56.60
IUUC-Gac-042636	Gasterosteus aculeatus	29.60	1.00e-08	53.90
IUUC-Gma-042775	Glycine max	64.51	0.00e+00	647.00
IUUC-Hvu-047625	Hordeum vulgare	33.73	4.00e-61	228.00
IUUC-Lpe-051238	Leersia perrieri	44.64	1.00e-52	200.00
IUUC-Mac-064444	Musa acuminata	37.64	3.00e-76	278.00
IUUC-Ont-071973	Oreochromis niloticus	29.03	2.00e-08	53.10
IUUC-Oba-075193	Oryza barthii	32.99	7.00e-55	207.00
IUUC-Ogl-077006	Oryza glaberrima	34.75	3.00e-59	222.00
IUUC-Ogu-078240	Oryza glumaepatula	40.65	2.00e-45	176.00
IUUC-Oin-079866	Oryza indica	34.74	6.00e-60	224.00
IUUC-Olo-081029	Oryza longistaminata	31.71	4.00e-49	188.00
IUUC-Ome-081703	Oryza meridionalis	31.86	7.00e-51	194.00
IUUC-Oni-082490	Oryza nivara	33.66	7.00e-56	211.00
IUUC-Opu-083315	Oryza punctata	32.08	2.00e-52	199.00
IUUC-Oru-084228	Oryza rufipogon	33.78	8.00e-58	217.00
IUUC-Osa-085981	Oryza sativa	34.58	1.00e-62	233.00
IUUC-Ppa-095896	Physcomitrella patens	42.65	8.00e-61	227.00
IUUC-Pop-099603	Populus trichocarpa	61.13	1.00e-90	326.00
IUUC-Ppe-101994	Prunus persica	48.10	5.00e-116	410.00
IUUC-Sit-109687	Setaria italica	33.56	9.00e-54	204.00
IUUC-Sly-111145	Solanum lycopersicum	47.90	2.00e-115	409.00
IUUC-Stu-112328	Solanum tuberosum	61.43	1.00e-90	326.00
IUUC-Sbi-114760	Sorghum bicolor	42.30	1.00e-45	176.00
IUUC-Tca-121056	Theobroma cacao	48.77	3.00e-117	414.00
IUUC-Tur-126115	Triticum urartu	32.84	5.00e-59	222.00
IUUC-Vvi-130955	Vitis vinifera	48.74	8.00e-125	440.00
IUUC-Xtr-131905	Xenopus tropicalis	32.77	1.00e-07	50.40
IUUC-Xma-133304	Xiphophorus maculatus	29.66	2.00e-08	53.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence