iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120963

Ensembl Protein ID

EOX96946

UniProt Accession

A0A061DXY4; A0A061DXY4_THECC

Genbank Protein ID

EOX96945.1; EOX96946.1

Protein Name

F-box/LRR-repeat protein 23, putative isoform 1

Genbank Nucleotide ID

CM001880; CM001880

Gene Name

TCM_006073

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006073	EOX96946	EOX96946

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	5.60e-09	37.1	320	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 93   tpeegpdaglldrlpeeilveilklldkee.llraarvcrrwqelasqkalwktv 146
           t  eg  + ++ +lp+++  +il++l + e l +a++vc +w+++++++ +w+++
   Q: 320  TTAEGE-TRNWLELPLDVTASILSRLGAFEiLKSAQNVCSQWRKICKDPLMWRSI 373
           555555.556789*************55554999*********99999****976 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSTVTESQSL EAETETETEW ESESESEPPK EPCLRNWLDL PRDVTASILL RLGAIEIIES 60
AQKVCTQWRN ISRDRSLWRS IDMRNAGDLH DMPYNLEVMC RHAIDRSCGG LIDINVEYFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGATCGTGAC AGAGTCAGAA TCGGTATTTG ATAATTTATA AAGAATTATC TGTTTTGATT 60
CATTAAAACT TAGTATTTTC TGTCTTACCT TTTTATTCCA CAAAAGCGTC TTGAAGTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF12937--F-box-like
PF13516--LRR_6

SMART

SM00256--FBOX
SM00367--LRR_CC

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005502	Arabidopsis lyrata	56.02	1.00e-81	296.00
IUUC-Bdi-014562	Brachypodium distachyon	42.95	5.00e-44	171.00
IUUC-Bol-015639	Brassica oleracea	53.51	3.00e-76	277.00
IUUC-Bra-017294	Brassica rapa	52.71	6.00e-82	296.00
IUUC-Lpe-051562	Leersia perrieri	39.74	2.00e-75	278.00
IUUC-Oba-075104	Oryza barthii	31.56	2.00e-73	270.00
IUUC-Ogl-077479	Oryza glaberrima	38.55	3.00e-39	154.00
IUUC-Ogu-078781	Oryza glumaepatula	29.48	8.00e-53	201.00
IUUC-Oin-079411	Oryza indica	38.55	1.00e-39	155.00
IUUC-Ome-081759	Oryza meridionalis	40.94	2.00e-37	150.00
IUUC-Oni-082766	Oryza nivara	29.70	9.00e-45	174.00
IUUC-Oru-084766	Oryza rufipogon	38.72	5.00e-41	162.00
IUUC-Osa-085658	Oryza sativa	38.55	1.00e-39	155.00
IUUC-Ppe-101358	Prunus persica	49.29	7.00e-67	246.00
IUUC-Sbi-114314	Sorghum bicolor	40.50	8.00e-48	183.00
IUUC-Tae-125315	Triticum aestivum	36.10	1.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence