iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__3124__AT4G11740.1	fgenesh2_kg.6__3124__AT4G11740.1	fgenesh2_kg.6__3124__AT4G11740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	7.00e-13	49.6	483	555

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 3    teqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsg 75
           +++ tl iR+pdG r  r+F +s++l+++++f++ ++v +  ++ Lv+p+Pr+ + + e++stl+++gL+++ 
   Q: 483  KNAITLLIRMPDGTRRGRRFLKSDKLQSLFNFIDIARVVKPNTYRLVRPYPRKAFGDGESESTLNDLGLTSKQ 555
           5577999**************************************************************9864 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MATPNQEAID TFISITGASE AVALQKLEEH RGDLNQAVNA YFGEGDRNVV SEAPVNISRD 60
DEMDIDDVIP APQSPLSMFN AARTMGRPFS LLDSDFARSI FDNDPLMPRP PFVSHPREVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATGGCGACA CCGAATCAGG AAGCAATCGA CACTTTCATC AGCATCACCG GCGCTTCAGA 60
GGCCGTCGCT CTTCAGAAAC TCGAGGTGAT TCGAATTTTA CTCATCTCGA TTCCTGTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom
IPR003903--UIM_dom

PROSITE

PS50033--UBX
PS50330--UIM

Pfam

PF00789--UBX

SMART

SM00166--UBX
SM00726--UIM

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus

KEGG

aly:ARALYDRAFT_489990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001073	Aegilops tauschii	46.17	1.00e-94	340.00
IUUC-Atr-002702	Amborella trichopoda	67.28	8.00e-56	211.00
IUUC-Ath-007541	Arabidopsis thaliana	91.52	0.00e+00	861.00
IUUC-Bdi-014955	Brachypodium distachyon	49.24	3.00e-98	352.00
IUUC-Bol-015077	Brassica oleracea	80.04	0.00e+00	687.00
IUUC-Bra-016932	Brassica rapa	78.84	0.00e+00	682.00
IUUC-Gma-043678	Glycine max	52.02	4.00e-107	381.00
IUUC-Hvu-047478	Hordeum vulgare	61.33	4.00e-56	211.00
IUUC-Lpe-051095	Leersia perrieri	47.80	3.00e-102	365.00
IUUC-Meu-056391	Macropus eugenii	27.54	1.60e-01	30.00
IUUC-Mtr-058440	Medicago truncatula	49.75	6.00e-103	367.00
IUUC-Mac-064592	Musa acuminata	48.19	3.00e-94	338.00
IUUC-Oba-075728	Oryza barthii	47.06	2.00e-94	339.00
IUUC-Obr-076827	Oryza brachyantha	46.59	2.00e-90	326.00
IUUC-Ogl-077428	Oryza glaberrima	48.24	3.00e-105	375.00
IUUC-Ogu-078920	Oryza glumaepatula	48.57	5.00e-97	347.00
IUUC-Oin-079876	Oryza indica	48.57	1.00e-96	346.00
IUUC-Olo-080220	Oryza longistaminata	47.89	1.00e-96	347.00
IUUC-Ome-081904	Oryza meridionalis	48.83	1.00e-103	369.00
IUUC-Oni-082433	Oryza nivara	47.06	1.00e-94	339.00
IUUC-Opu-083184	Oryza punctata	49.00	6.00e-102	363.00
IUUC-Oru-084236	Oryza rufipogon	47.67	2.00e-96	345.00
IUUC-Osa-085356	Oryza sativa	48.66	2.00e-107	382.00
IUUC-Pop-098865	Populus trichocarpa	54.44	9.00e-127	446.00
IUUC-Ppe-101824	Prunus persica	54.84	4.00e-99	354.00
IUUC-Smo-109261	Selaginella moellendorffii	51.64	2.00e-49	188.00
IUUC-Sit-110274	Setaria italica	46.52	1.00e-89	323.00
IUUC-Sly-111038	Solanum lycopersicum	48.62	2.00e-119	422.00
IUUC-Stu-112767	Solanum tuberosum	46.29	4.00e-104	371.00
IUUC-Sbi-114655	Sorghum bicolor	49.83	1.00e-103	369.00
IUUC-Tca-121591	Theobroma cacao	56.38	3.00e-124	438.00
IUUC-Tae-125521	Triticum aestivum	50.93	5.00e-109	387.00
IUUC-Tur-126134	Triticum urartu	49.83	5.00e-101	361.00
IUUC-Vvi-130858	Vitis vinifera	54.86	1.00e-134	472.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence