iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099087

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_786716; POPTR_0019s04500g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s04500	POPTR_0019s04500.1	POPTR_0019s04500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-29	103.0	69	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +peef+CpIs e+M dPvvl++G+tyd   I+ wl++g++tcP t+q l+++ l+Pn+ +r++i++wc+e+++
   Q: 69   LPEEFKCPISREIMGDPVVLATGQTYDLPFIQGWLNDGHRTCPQTQQVLSHTILTPNHLVREMISQWCKERGI 141
           69*******************************************************************9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAKSGVLETI PCTVTKATEL KKELEKLVKA ILDEEDYRVE VTDEAMRVLS VLKELKFKKS 60
LKIVDDTVLP EEFKCPISRE IMGDPVVLAT GQTYDLPFIQ GWLNDGHRTC PQTQQVLSHT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGA GAGAGAGATC AAAACAAAAG AAATTGCAAG AAAGAAAGAA AGAAACAAGA 60
ACTGATGAAT CACACAAAAC ATAATACTTT CTTTTTTCAG TTTTTTTCAC TCATAAATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0019s04500g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	43.03	8.00e-80	290.00
IUUC-Bdi-014069	Brachypodium distachyon	54.69	4.00e-112	397.00
IUUC-Gma-043565	Glycine max	69.43	6.00e-166	576.00
IUUC-Hvu-047411	Hordeum vulgare	45.83	1.00e-77	282.00
IUUC-Lpe-050825	Leersia perrieri	52.47	5.00e-111	394.00
IUUC-Mtr-058046	Medicago truncatula	65.64	2.00e-161	561.00
IUUC-Ogl-077647	Oryza glaberrima	53.65	4.00e-110	390.00
IUUC-Olo-080462	Oryza longistaminata	53.52	2.00e-110	392.00
IUUC-Ome-081796	Oryza meridionalis	53.25	4.00e-110	390.00
IUUC-Opu-084131	Oryza punctata	53.79	1.00e-110	393.00
IUUC-Osa-085556	Oryza sativa	53.39	1.00e-109	389.00
IUUC-Sit-110812	Setaria italica	52.86	6.00e-108	384.00
IUUC-Sbi-114814	Sorghum bicolor	52.58	8.00e-109	386.00
IUUC-Tur-126060	Triticum urartu	41.83	9.00e-80	290.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence