iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058411

Ensembl Protein ID

AES95832

UniProt Accession

G7KDR5; A0A0C3XFP7; G7KDR5_MEDTR

Genbank Protein ID

AES95832.2

Protein Name

RING-H2 zinc finger protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g030010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g030010	AES95832	AES95832

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-07	33.0	148	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++  ++lp C H+fh+ C+  w       + + +CPlCr
   Q: 148  CSVCLNEFqdDESIRLLPkCSHAFHLPCIDTW------LKSHSNCPLCR 190
           ********7644599999**************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASLGNPKAW VPYMNSKDCS QGFCSVYCPQ WCYAIYPPPS PSPFEFPDED SSPNFSPLVI 60
AIIGILASAF LLVTYYTIIS KYCGRRESSA SESREANDEF EDDHHHHHNP SIHEPWHVST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCATCAGCA TCCCATTTTC TCTTCCCTTT ATCTTGCTTT CCATCTAAGC CCTTTATCCC 60
TTTTTCCATG CTCTCTTTTA CCTTGTTAGA GATTTAAATT CTCTTGTATG CTACTAATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_5g030010

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	45.30	4.00e-73	267.00
IUUC-Aly-006095	Arabidopsis lyrata	42.94	2.00e-52	198.00
IUUC-Ath-006943	Arabidopsis thaliana	56.31	9.00e-46	176.00
IUUC-Bdi-014160	Brachypodium distachyon	54.67	2.00e-60	226.00
IUUC-Bol-016002	Brassica oleracea	50.50	7.00e-44	170.00
IUUC-Bra-017763	Brassica rapa	48.73	2.00e-44	172.00
IUUC-Cne-026941	Cryptococcus neoformans	35.80	7.00e-10	58.50
IUUC-Gma-042838	Glycine max	67.60	6.00e-111	393.00
IUUC-Hvu-047701	Hordeum vulgare	43.82	8.00e-61	226.00
IUUC-Lpe-051459	Leersia perrieri	53.72	3.00e-62	231.00
IUUC-Mac-065580	Musa acuminata	45.05	6.00e-74	271.00
IUUC-Oba-075056	Oryza barthii	54.04	1.00e-57	216.00
IUUC-Obr-076311	Oryza brachyantha	40.05	1.00e-59	223.00
IUUC-Ogl-077644	Oryza glaberrima	54.04	9.00e-58	216.00
IUUC-Ogu-078989	Oryza glumaepatula	53.62	2.00e-57	215.00
IUUC-Oin-079716	Oryza indica	54.04	1.00e-57	216.00
IUUC-Olo-081066	Oryza longistaminata	53.39	4.00e-61	228.00
IUUC-Ome-081279	Oryza meridionalis	57.87	3.00e-57	214.00
IUUC-Oni-082896	Oryza nivara	54.04	1.00e-57	216.00
IUUC-Opu-083796	Oryza punctata	55.02	3.00e-58	218.00
IUUC-Oru-084594	Oryza rufipogon	53.62	4.00e-57	214.00
IUUC-Osa-086004	Oryza sativa	53.62	3.00e-57	214.00
IUUC-Ppa-095182	Physcomitrella patens	47.89	3.00e-28	119.00
IUUC-Pop-099671	Populus trichocarpa	56.62	8.00e-109	386.00
IUUC-Ppe-101720	Prunus persica	49.60	2.00e-87	315.00
IUUC-Smo-108989	Selaginella moellendorffii	39.46	5.00e-22	96.70
IUUC-Sit-109894	Setaria italica	61.86	2.00e-60	225.00
IUUC-Sly-110835	Solanum lycopersicum	45.14	6.00e-76	276.00
IUUC-Stu-112220	Solanum tuberosum	45.95	4.00e-77	280.00
IUUC-Sbi-114789	Sorghum bicolor	41.35	2.00e-63	235.00
IUUC-Tca-121189	Theobroma cacao	57.11	3.00e-106	377.00
IUUC-Tae-124557	Triticum aestivum	61.34	3.00e-59	221.00
IUUC-Tur-126697	Triticum urartu	34.88	9.00e-31	126.00
IUUC-Vvi-130829	Vitis vinifera	40.73	1.00e-55	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence