iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095182

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544909

Gene Name

PHYPADRAFT_49978

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S20_276V6	PP1S20_276V6.1	PP1S20_276V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.00e-07	30.6	141	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f   + +++lp C+H fh  C+  w        ++ +CPlCr
   Q: 141  CSVCLGEFkvGEVLRILPkCNHPFHIPCIDTW------LVTSSTCPLCR 183
           ********6655599999**************......**********8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRVTMKQKYA VRTRYLETES PGSLNNPYAP SPYIPAPIPP GSSTPRPNAF SPAVVAVIGV 60
LAGAFLIVSY YRIFAKYCNR HHFPFWGTRR NGRDGGTSAI VLMEEHGAWP SNAVGLDDAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCCGTTCCT CTTGCCTCCA CTCACTCCTT GCATTCGCCG CTAGCACCAC TGCGTGTCTC 60
GCGCTCGAAG CGCCCTCACA GTCCCTGTGT TGTTTAGTGG GTATGGTGCT CCGAGTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_49978

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	50.00	9.00e-35	140.00
IUUC-Aly-006272	Arabidopsis lyrata	47.14	9.00e-33	133.00
IUUC-Ath-006705	Arabidopsis thaliana	44.60	1.00e-31	129.00
IUUC-Bdi-014160	Brachypodium distachyon	48.43	4.00e-34	137.00
IUUC-Bol-016002	Brassica oleracea	40.44	2.00e-24	105.00
IUUC-Bra-017128	Brassica rapa	49.25	3.00e-30	125.00
IUUC-Ggr-040021	Gaeumannomyces graminis	57.45	1.00e-12	67.00
IUUC-Gma-042838	Glycine max	40.53	3.00e-32	132.00
IUUC-Hvu-047701	Hordeum vulgare	48.50	5.00e-37	147.00
IUUC-Lpe-051459	Leersia perrieri	48.67	1.00e-33	136.00
IUUC-Mpo-057522	Magnaporthe poae	57.45	9.00e-13	67.80
IUUC-Mtr-058411	Medicago truncatula	47.48	9.00e-33	133.00
IUUC-Mac-065423	Musa acuminata	52.41	3.00e-38	151.00
IUUC-Oba-075056	Oryza barthii	45.16	3.00e-32	131.00
IUUC-Obr-076311	Oryza brachyantha	44.13	3.00e-32	131.00
IUUC-Ogl-077644	Oryza glaberrima	45.16	3.00e-32	131.00
IUUC-Ogu-078989	Oryza glumaepatula	45.16	4.00e-32	131.00
IUUC-Oin-079716	Oryza indica	45.16	3.00e-32	131.00
IUUC-Olo-081066	Oryza longistaminata	44.24	2.00e-33	135.00
IUUC-Ome-081279	Oryza meridionalis	43.93	2.00e-32	132.00
IUUC-Oni-082896	Oryza nivara	45.16	3.00e-32	131.00
IUUC-Opu-083796	Oryza punctata	44.10	2.00e-32	132.00
IUUC-Oru-084594	Oryza rufipogon	45.16	3.00e-32	131.00
IUUC-Osa-086004	Oryza sativa	45.16	3.00e-32	132.00
IUUC-Pop-099300	Populus trichocarpa	40.38	5.00e-37	147.00
IUUC-Ppe-101180	Prunus persica	44.76	7.00e-33	133.00
IUUC-Smo-108989	Selaginella moellendorffii	40.27	7.00e-21	92.80
IUUC-Sit-109894	Setaria italica	52.35	5.00e-34	137.00
IUUC-Sly-110835	Solanum lycopersicum	47.24	6.00e-34	137.00
IUUC-Stu-112902	Solanum tuberosum	39.64	3.00e-33	134.00
IUUC-Sbi-114789	Sorghum bicolor	54.73	4.00e-36	144.00
IUUC-Tca-121189	Theobroma cacao	51.02	6.00e-37	147.00
IUUC-Tae-123315	Triticum aestivum	46.82	5.00e-36	144.00
IUUC-Tur-126697	Triticum urartu	58.23	9.00e-22	96.70
IUUC-Vvi-130892	Vitis vinifera	42.61	5.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence