iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s12260	POPTR_0018s12260.8	POPTR_0018s12260.8
POPTR_0018s12260	POPTR_0018s12260.3	POPTR_0018s12260.3
POPTR_0018s12260	POPTR_0018s12260.4	POPTR_0018s12260.4
POPTR_0018s12260	POPTR_0018s12260.1	POPTR_0018s12260.1
POPTR_0018s12260	POPTR_0018s12260.7	POPTR_0018s12260.7
POPTR_0018s12260	POPTR_0018s12260.2	POPTR_0018s12260.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	33.33	3.00e-05	45.10	IUUC-Sce-106402

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSNSSRPGS RTSRTRPNSR SSRFFSSLIC GGSSSSRTAR HEMEDYPDKI LMNSAEQCCP 60
VIEVQNSAEE SSVVSNTVTG SRSSDTETGG SSGNRIRASE GTSEKYGYRN LDTNSRGKCL 120

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Nucleotide Sequence
(Fasta)

ATACGAAAAC AAAAACAAAA ACAAAAACAA AAACTCTCTC CTCTAATAAT TGCAACAAGA 60
AATTTCAATT TCAAAATAAT AAAATAAAAA ATATATATAC ATATTAGCTA TACAGTTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0018s12260g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000102	Aegilops tauschii	46.18	2.00e-50	193.00
IUUC-Bgr-012120	Blumeria graminis	39.34	7.00e-12	65.10
IUUC-Bta-012330	Bos taurus	46.38	2.00e-15	77.40
IUUC-Bci-013936	Botrytis cinerea	54.17	1.00e-15	77.40
IUUC-Bdi-014055	Brachypodium distachyon	53.18	2.00e-69	256.00
IUUC-Dse-031214	Dothistroma septosporum	48.08	1.00e-13	70.50
IUUC-Hvu-047617	Hordeum vulgare	53.87	2.00e-57	215.00
IUUC-Itr-048774	Ictidomys tridecemlineatus	39.80	2.00e-17	83.60
IUUC-Mtr-057891	Medicago truncatula	52.29	8.00e-119	420.00
IUUC-Mla-059171	Melampsora laricipopulina	34.44	5.00e-09	55.50
IUUC-Mac-065104	Musa acuminata	61.83	6.00e-73	267.00
IUUC-Oba-075366	Oryza barthii	44.08	3.00e-68	251.00
IUUC-Obr-076890	Oryza brachyantha	52.03	7.00e-66	243.00
IUUC-Ogl-077114	Oryza glaberrima	44.08	3.00e-68	251.00
IUUC-Oin-079221	Oryza indica	52.15	1.00e-66	246.00
IUUC-Ome-081877	Oryza meridionalis	52.15	1.00e-66	246.00
IUUC-Oni-083035	Oryza nivara	52.15	1.00e-66	246.00
IUUC-Opu-084111	Oryza punctata	51.82	2.00e-66	245.00
IUUC-Oru-084733	Oryza rufipogon	52.15	1.00e-66	246.00
IUUC-Osa-085934	Oryza sativa	52.15	1.00e-66	246.00
IUUC-Oar-090427	Ovis aries	40.23	5.00e-15	75.90
IUUC-Ppe-101202	Prunus persica	61.69	8.00e-145	506.00
IUUC-Sce-106402	Saccharomyces cerevisiae	33.33	9.00e-06	44.70
IUUC-Ssl-108601	Sclerotinia sclerotiorum	50.00	7.00e-16	77.80
IUUC-Sit-109942	Setaria italica	51.21	4.00e-64	238.00
IUUC-Sly-111443	Solanum lycopersicum	48.50	7.00e-89	320.00
IUUC-Stu-112633	Solanum tuberosum	56.23	3.00e-78	285.00
IUUC-Tca-121072	Theobroma cacao	65.19	1.00e-151	528.00
IUUC-Tae-124806	Triticum aestivum	51.80	1.00e-57	217.00
IUUC-Tur-125972	Triticum urartu	50.17	1.00e-50	193.00
IUUC-Vda-129899	Verticillium dahliae	50.94	3.00e-14	72.80
IUUC-Yli-134656	Yarrowia lipolytica	44.00	2.00e-12	66.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence