iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065397

Ensembl Protein ID

GSMUA_Achr5P03110_001

UniProt Accession

M0SV90; M0SV90_MUSAM

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr5G03110_001	GSMUA_Achr5T03110_001	GSMUA_Achr5P03110_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.10e-17	64.8	76	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt..lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           vkvs++g+++++++dl+++ ++++L++a+++   +          +  +se a+ YeD+dGDl+ l++D+++++++s      s++rl
   Q: 76   VKVSMDGAPYLRKIDLRVYRGYKELREALEDmfGCfslgeasgaeGCTGSEHAMAYEDKDGDLM-LVGDVPWEMFIS------SCKRL 156
           9******************************653388999999989999***************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 157  RIMK 160
           ***8 PP

Organism

Musa acuminata

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEAEASYVKD TELRLGLPGT HAPVATRGSK RALPEDDEKS HGKSKARVVG WPPIQSYRKN 60
SFRARKAEAE VAGSYVKVSM DGAPYLRKID LRVYRGYKEL REALEDMFGC FSLGEASGAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCTG AGGCGAGCTA CGTCAAGGAC ACCGAGCTAA GGCTCGGTTT GCCCGGCACC 60
CACGCGCCGG TAGCAACGAG GGGAAGCAAA CGAGCGCTGC CGGAGGACGA CGAGAAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

mus:103983803

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014020	Brachypodium distachyon	52.85	5.00e-45	173.00
IUUC-Ome-081889	Oryza meridionalis	54.17	2.00e-36	144.00
IUUC-Opu-083449	Oryza punctata	46.70	2.00e-41	161.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence