iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111253

Ensembl Protein ID

Solyc01g109200.2.1

UniProt Accession

K4B3D3; K4B3D3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g109200.2	Solyc01g109200.2.1	Solyc01g109200.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-07	32.0	91	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   ++  ++lp C H+fh dC+  w       + +++CPlCr
   Q: 91   CAVCLLEFeenDY-MRTLPvCSHAFHVDCIDIW------LKSHANCPLCR 133
           ****999965333.889999*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVVIIATAFV IITYSRLLSR HLLRLHGRYR LWRRRRRRYV PSSSAGDIES PPYPFDPTGA 60
FHVLSPYGLD DSVIKTIPLS VYTRKSGVHD CAVCLLEFEE NDYMRTLPVC SHAFHVDCID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAACGCAC TAAAACATTT ACACCAACAC ATTCCCCCAT TAACCAAAGC CCCCCCTCAT 60
AAAGGGAGTA GAAATAAATA AAAGCACCAA TTCCACCTTT TGTTAATTGC CCCCTGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	49.37	3.00e-60	224.00
IUUC-Aly-005738	Arabidopsis lyrata	50.63	7.00e-59	220.00
IUUC-Ath-006761	Arabidopsis thaliana	51.78	3.00e-60	224.00
IUUC-Afu-008977	Aspergillus fumigatus	40.23	1.00e-11	63.50
IUUC-Bdi-014398	Brachypodium distachyon	42.99	2.00e-31	129.00
IUUC-Bol-015520	Brassica oleracea	45.93	1.00e-56	212.00
IUUC-Bra-017477	Brassica rapa	46.10	2.00e-56	212.00
IUUC-Gma-043732	Glycine max	62.46	7.00e-88	316.00
IUUC-Lpe-051662	Leersia perrieri	37.38	6.00e-26	110.00
IUUC-Mtr-058344	Medicago truncatula	59.87	2.00e-81	295.00
IUUC-Mac-065095	Musa acuminata	37.71	9.00e-39	153.00
IUUC-Ogu-077985	Oryza glumaepatula	39.45	5.00e-24	104.00
IUUC-Oin-079093	Oryza indica	38.53	5.00e-22	98.20
IUUC-Opu-083940	Oryza punctata	38.84	5.00e-24	104.00
IUUC-Oru-084986	Oryza rufipogon	36.92	5.00e-17	81.30
IUUC-Pop-099495	Populus trichocarpa	64.17	1.00e-93	335.00
IUUC-Ppe-101726	Prunus persica	60.27	1.00e-89	322.00
IUUC-Sit-109801	Setaria italica	40.09	7.00e-26	110.00
IUUC-Stu-112012	Solanum tuberosum	96.09	6.00e-142	496.00
IUUC-Sbi-114003	Sorghum bicolor	34.56	1.00e-28	120.00
IUUC-Tca-120931	Theobroma cacao	63.61	7.00e-99	353.00
IUUC-Tae-123946	Triticum aestivum	42.31	3.00e-34	137.00
IUUC-Vvi-131492	Vitis vinifera	65.19	7.00e-97	346.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence