iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049314

Ensembl Protein ID

CAY69464

UniProt Accession

C4R1U0; C4R1U0_KOMPG

Genbank Protein ID

CAY69464.1

Protein Name

Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (With Rad4p)

Genbank Nucleotide ID

FN392320

Gene Name

PAS_chr2-2_0445

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr2-2_0445	CAY69464	CAY69464

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.40e-21	73.3	129	167
ULD/UDP/UBQ/UBQ_Other	7.30e-09	33.5	2	68

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +e ++++++eMG+dr+++  aLraa+nn+++AveyLl+g
   Q: 129  RENAIRNIMEMGYDRSQVEAALRAAFNNPDRAVEYLLTG 167
           6889*********************************97 PP

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstih 68
           ++++k+l+     l v+p+dt++  Kek+ + ++  + +++ +y+Gk+L+ddk++ ++++k++++i+
   Q: 2    KIVFKDLKKEKVILDVDPTDTILSAKEKLATVKNSDASKIKFVYSGKVLQDDKDFDAFKVKENDVII 68
           677777777666677**************************************************96 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MKIVFKDLKK EKVILDVDPT DTILSAKEKL ATVKNSDASK IKFVYSGKVL QDDKDFDAFK 60
VKENDVIIFM LPSVFKKEEP KNLENRIDKT STESSKTTTI AAPGIAVPPV PVNTSGSFNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAATAG TTTTTAAAGA TCTTAAAAAA GAAAAAGTAA TTCTAGATGT GGACCCGACC 60
GATACTGTAC GTATTTACTT TGTGAAACTG GAAATTTGAA TATTTCTAAC CGGCAATCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0000111--C:nucleotide-excision repair factor 2 complex
GO:0000502--C:proteasome complex
GO:0003684--F:damaged DNA binding
GO:0000224--F:peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
GO:0042177--P:negative regulation of protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006289--P:nucleotide-excision repair
GO:0006517--P:protein deglycosylation
GO:0016567--P:protein ubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

ppa:PAS_chr2-2_0445

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	40.08	1.00e-31	128.00
IUUC-Aml-001195	Ailuropoda melanoleuca	62.00	5.00e-14	69.70
IUUC-Atr-003116	Amborella trichopoda	37.34	1.00e-27	114.00
IUUC-Apl-003371	Anas platyrhynchos	37.02	1.00e-27	115.00
IUUC-Aca-004599	Anolis carolinensis	60.38	2.00e-14	71.20
IUUC-Aly-005694	Arabidopsis lyrata	31.88	1.00e-40	158.00
IUUC-Ath-006688	Arabidopsis thaliana	34.76	7.00e-29	119.00
IUUC-Ago-007830	Ashbya gossypii	34.14	1.00e-45	174.00
IUUC-Acl-008212	Aspergillus clavatus	47.75	2.00e-22	97.80
IUUC-Afl-008605	Aspergillus flavus	36.02	2.00e-31	127.00
IUUC-Afu-008877	Aspergillus fumigatus	38.96	1.00e-30	124.00
IUUC-Ani-009460	Aspergillus nidulans	40.09	6.00e-31	125.00
IUUC-Aor-010032	Aspergillus oryzae	36.02	3.00e-31	127.00
IUUC-Ate-010458	Aspergillus terreus	40.09	5.00e-37	145.00
IUUC-Ame-011107	Astyanax mexicanus	58.93	4.00e-15	73.60
IUUC-Bgr-012056	Blumeria graminis	34.22	1.00e-22	98.20
IUUC-Bta-012922	Bos taurus	36.91	3.00e-29	120.00
IUUC-Bci-013933	Botrytis cinerea	32.80	8.00e-24	102.00
IUUC-Bdi-014253	Brachypodium distachyon	39.66	1.00e-31	128.00
IUUC-Bol-015272	Brassica oleracea	30.89	2.00e-38	150.00
IUUC-Bra-016970	Brassica rapa	32.51	8.00e-41	158.00
IUUC-Cel-018364	Caenorhabditis elegans	32.74	2.00e-14	70.90
IUUC-Cja-018772	Callithrix jacchus	35.15	5.00e-27	113.00
IUUC-Cfa-020683	Canis familiaris	60.38	2.00e-14	71.20
IUUC-Cpo-022145	Cavia porcellus	39.81	2.00e-15	74.30
IUUC-Cre-022810	Chlamydomonas reinhardtii	32.46	7.00e-15	72.80
IUUC-Csa-023714	Chlorocebus sabaeus	35.15	4.00e-27	113.00
IUUC-Cho-024814	Choloepus hoffmanni	36.79	5.00e-13	66.20
IUUC-Cin-025741	Ciona intestinalis	33.80	4.00e-24	103.00
IUUC-Csv-025823	Ciona savignyi	27.27	3.00e-20	89.70
IUUC-Cgl-026495	Colletotrichum gloeosporioides	34.97	2.00e-25	107.00
IUUC-Cne-027056	Cryptococcus neoformans	44.04	8.00e-15	72.40
IUUC-Cme-027260	Cyanidioschyzon merolae	22.89	2.00e-16	78.20
IUUC-Dre-028369	Danio rerio	36.33	4.00e-31	126.00
IUUC-Dno-029543	Dasypus novemcinctus	36.32	6.00e-28	116.00
IUUC-Dor-030358	Dipodomys ordii	35.78	5.00e-26	109.00
IUUC-Dse-031336	Dothistroma septosporum	54.35	3.00e-25	107.00
IUUC-Dme-031944	Drosophila melanogaster	25.82	4.00e-31	125.00
IUUC-Ete-032583	Echinops telfairi	35.45	9.00e-13	65.90
IUUC-Eca-034243	Equus caballus	36.91	3.00e-29	120.00
IUUC-Eeu-034721	Erinaceus europaeus	60.38	3.00e-14	70.50
IUUC-Fca-035679	Felis catus	36.48	1.00e-27	115.00
IUUC-Fal-037148	Ficedula albicollis	39.29	4.00e-15	73.60
IUUC-Fox-037960	Fusarium oxysporum	37.23	2.00e-25	107.00
IUUC-Fso-038107	Fusarium solani	36.17	1.00e-27	114.00
IUUC-Gmo-038528	Gadus morhua	35.96	1.00e-26	111.00
IUUC-Ggr-040116	Gaeumannomyces graminis	50.53	3.00e-22	97.40
IUUC-Gga-040544	Gallus gallus	60.38	1.00e-14	72.00
IUUC-Gac-042298	Gasterosteus aculeatus	29.32	2.00e-31	127.00
IUUC-Gma-043331	Glycine max	30.24	7.00e-36	142.00
IUUC-Ggo-045125	Gorilla gorilla	35.15	5.00e-27	113.00
IUUC-Hsa-046519	Homo sapiens	35.15	5.00e-27	113.00
IUUC-Hvu-047832	Hordeum vulgare	40.08	1.00e-31	128.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	60.38	2.00e-14	71.20
IUUC-Lch-050563	Latimeria chalumnae	31.91	1.00e-18	85.10
IUUC-Lpe-051168	Leersia perrieri	30.73	8.00e-38	148.00
IUUC-Loc-051748	Lepisosteus oculatus	35.29	1.00e-27	115.00
IUUC-Lma-053328	Leptosphaeria maculans	37.84	7.00e-11	55.80
IUUC-Laf-054293	Loxodonta africana	34.73	2.00e-26	110.00
IUUC-Mcc-055600	Macaca mulatta	35.15	8.00e-27	112.00
IUUC-Meu-056459	Macropus eugenii	38.36	3.00e-27	113.00
IUUC-Mor-057287	Magnaporthe oryzae	30.16	1.00e-22	98.60
IUUC-Mpo-057609	Magnaporthe poae	48.91	5.00e-21	92.40
IUUC-Mtr-058713	Medicago truncatula	36.52	7.00e-31	125.00
IUUC-Mla-058961	Melampsora laricipopulina	40.31	1.00e-21	95.50
IUUC-Mvi-060220	Microbotryum violaceum	37.90	6.00e-17	80.10
IUUC-Mmr-061159	Microcebus murinus	35.00	6.00e-27	112.00
IUUC-Mdo-061967	Monodelphis domestica	59.26	2.00e-14	70.90
IUUC-Mmu-063258	Mus musculus	36.07	6.00e-28	116.00
IUUC-Mac-065029	Musa acuminata	28.65	1.00e-31	128.00
IUUC-Mpu-066389	Mustela putorius furo	60.38	3.00e-14	70.90
IUUC-Mlu-067999	Myotis lucifugus	36.60	7.00e-29	119.00
IUUC-Nfi-068390	Neosartorya fischeri	38.96	1.00e-30	124.00
IUUC-Ncr-068685	Neurospora crassa	30.77	6.00e-22	96.30
IUUC-Nle-069655	Nomascus leucogenys	35.15	4.00e-27	113.00
IUUC-Opr-070234	Ochotona princeps	30.00	3.00e-03	33.50
IUUC-Ont-072484	Oreochromis niloticus	33.33	1.00e-25	108.00
IUUC-Oan-073572	Ornithorhynchus anatinus	30.61	1.00e-17	81.60
IUUC-Ocu-074831	Oryctolagus cuniculus	34.58	2.00e-25	107.00
IUUC-Oba-074972	Oryza barthii	30.48	1.00e-40	158.00
IUUC-Obr-076660	Oryza brachyantha	28.95	4.00e-38	149.00
IUUC-Ogl-077067	Oryza glaberrima	29.26	3.00e-39	153.00
IUUC-Ogu-078101	Oryza glumaepatula	37.50	3.00e-32	130.00
IUUC-Oin-079203	Oryza indica	29.82	6.00e-40	155.00
IUUC-Olo-080559	Oryza longistaminata	31.65	6.00e-42	162.00
IUUC-Ome-081652	Oryza meridionalis	37.50	3.00e-32	130.00
IUUC-Oni-082812	Oryza nivara	31.25	2.00e-41	160.00
IUUC-Opu-083963	Oryza punctata	34.03	1.00e-33	134.00
IUUC-Oru-085266	Oryza rufipogon	35.06	2.00e-29	120.00
IUUC-Osa-085951	Oryza sativa	30.08	6.00e-40	155.00
IUUC-Ola-086540	Oryzias latipes	29.77	3.00e-21	94.00
IUUC-Olu-087843	Ostreococcus lucimarinus	36.64	1.00e-29	121.00
IUUC-Oga-088023	Otolemur garnettii	35.29	1.00e-26	112.00
IUUC-Oar-089964	Ovis aries	36.91	3.00e-29	120.00
IUUC-Ptr-091165	Pan troglodytes	35.15	5.00e-27	113.00
IUUC-Pan-092009	Papio anubis	34.71	1.00e-25	108.00
IUUC-Psi-093477	Pelodiscus sinensis	60.38	3.00e-14	70.90
IUUC-Pno-095064	Phaeosphaeria nodorum	47.73	2.00e-18	84.30
IUUC-Ppa-095654	Physcomitrella patens	36.44	7.00e-29	119.00
IUUC-Pfo-097385	Poecilia formosa	33.05	2.00e-27	114.00
IUUC-Pab-097868	Pongo abelii	35.15	1.00e-26	111.00
IUUC-Pop-099416	Populus trichocarpa	30.17	9.00e-36	141.00
IUUC-Pca-100348	Procavia capensis	36.91	4.00e-27	113.00
IUUC-Ppe-101368	Prunus persica	32.10	1.00e-35	141.00
IUUC-Pva-102137	Pteropus vampyrus	36.91	3.00e-29	120.00
IUUC-Pgr-103618	Puccinia graminis	35.91	4.00e-28	116.00
IUUC-Ptt-103717	Puccinia triticina	36.78	1.00e-32	131.00
IUUC-Pte-104303	Pyrenophora teres	50.53	1.00e-23	102.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	50.53	1.00e-23	101.00
IUUC-Rno-104844	Rattus norvegicus	36.21	4.00e-28	116.00
IUUC-Sce-106214	Saccharomyces cerevisiae	41.01	3.00e-24	103.00
IUUC-Sha-107073	Sarcophilus harrisii	60.38	3.00e-14	70.90
IUUC-Sja-107851	Schizosaccharomyces japonicus	45.65	1.00e-46	177.00
IUUC-Spo-108298	Schizosaccharomyces pombe	38.90	1.00e-60	224.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	32.28	5.00e-23	99.80
IUUC-Smo-109518	Selaginella moellendorffii	30.29	1.00e-13	68.60
IUUC-Sit-109813	Setaria italica	32.18	1.00e-36	144.00
IUUC-Sly-111349	Solanum lycopersicum	35.19	5.00e-32	129.00
IUUC-Stu-112306	Solanum tuberosum	30.05	8.00e-34	135.00
IUUC-Sar-112925	Sorex araneus	36.84	1.00e-24	105.00
IUUC-Sbi-114459	Sorghum bicolor	30.73	6.00e-38	149.00
IUUC-Sre-114894	Sporisorium reilianum	55.07	4.00e-14	70.50
IUUC-Ssc-116329	Sus scrofa	36.91	3.00e-29	120.00
IUUC-Tgu-116918	Taeniopygia guttata	39.29	4.00e-15	73.60
IUUC-Tru-117920	Takifugu rubripes	37.23	5.00e-32	129.00
IUUC-Tsy-118836	Tarsius syrichta	35.45	1.00e-12	65.50
IUUC-Tni-120493	Tetraodon nigroviridis	36.28	4.00e-29	119.00
IUUC-Tca-121594	Theobroma cacao	28.14	2.00e-32	130.00
IUUC-Tre-121911	Trichoderma reesei	39.57	5.00e-36	142.00
IUUC-Tvi-122617	Trichoderma virens	39.66	3.00e-35	140.00
IUUC-Tae-125620	Triticum aestivum	37.29	3.00e-34	137.00
IUUC-Tur-126610	Triticum urartu	40.08	3.00e-32	130.00
IUUC-Tme-127092	Tuber melanosporum	38.86	1.00e-28	118.00
IUUC-Tbe-127493	Tupaia belangeri	37.27	8.00e-13	65.90
IUUC-Ttr-128464	Tursiops truncatus	36.91	3.00e-29	120.00
IUUC-Uma-129484	Ustilago maydis	57.14	9.00e-14	69.30
IUUC-Vda-129946	Verticillium dahliae	34.97	4.00e-25	106.00
IUUC-Vpa-130357	Vicugna pacos	60.38	2.00e-14	71.20
IUUC-Vvi-130842	Vitis vinifera	37.34	1.00e-29	121.00
IUUC-Xtr-132679	Xenopus tropicalis	60.38	2.00e-14	71.60
IUUC-Xma-133503	Xiphophorus maculatus	32.35	5.00e-25	106.00
IUUC-Yli-134615	Yarrowia lipolytica	43.96	3.00e-36	143.00
IUUC-Zma-135678	Zea mays	39.32	5.00e-35	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence