iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057776

Ensembl Protein ID

KEH39889

UniProt Accession

I3SLN6; I3SLN6_MEDTR

Genbank Protein ID

AFK41178.1; KEH39889.1

Protein Name

RING-finger ubiquitin ligase

Genbank Nucleotide ID

BT141384; CM001217

Gene Name

MTR_1g014710

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g014710	KEH39889	KEH39889

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.00e-06	28.4	233	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e +   d+   lpC+H+fh  Cl+ w         + +CP+Cr
   Q: 233  CAICRENLvlNDQMQELPCKHTFHPPCLKPW------LDEHNSCPICR 274
           ******9988555778***************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MESENLVKQE LEELQKQLGK KQKFEDAVSS LKSLLQTTYP LASTSLRKSF YSVICRVATV 60
LKTRYTAPGF WSAGLSLFEQ AILFVSEPSE KEHLKACIAQ AREHLHLEDN PSQTSQPAVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAATTCA TCAATGACGT GGCAAAAAAT GATTGGATAA CCTACTCAAA GAACGGTAGG 60
AACATATGTA GACGATCATT CCCTTCAGTT TCCCCTTGCC GAAGAAAATC AATTCCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g014710

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000652	Aegilops tauschii	49.12	1.00e-77	283.00
IUUC-Atr-002467	Amborella trichopoda	75.00	2.00e-42	163.00
IUUC-Aly-005810	Arabidopsis lyrata	62.12	2.00e-90	325.00
IUUC-Ath-007091	Arabidopsis thaliana	61.77	4.00e-90	323.00
IUUC-Bdi-014952	Brachypodium distachyon	55.92	3.00e-85	307.00
IUUC-Bol-016249	Brassica oleracea	61.09	3.00e-93	334.00
IUUC-Bra-017222	Brassica rapa	59.86	7.00e-85	306.00
IUUC-Gma-044003	Glycine max	80.84	6.00e-126	442.00
IUUC-Hvu-047837	Hordeum vulgare	58.59	8.00e-56	209.00
IUUC-Lpe-051691	Leersia perrieri	53.27	5.00e-83	300.00
IUUC-Mac-064671	Musa acuminata	57.31	5.00e-95	340.00
IUUC-Oba-075555	Oryza barthii	53.11	1.00e-82	298.00
IUUC-Obr-076610	Oryza brachyantha	53.65	4.00e-86	310.00
IUUC-Ogl-077481	Oryza glaberrima	53.11	1.00e-82	298.00
IUUC-Ogu-078564	Oryza glumaepatula	52.48	5.00e-82	296.00
IUUC-Oin-079836	Oryza indica	52.80	1.00e-82	298.00
IUUC-Olo-080714	Oryza longistaminata	56.41	7.00e-77	279.00
IUUC-Ome-081489	Oryza meridionalis	53.44	6.00e-83	300.00
IUUC-Oni-082870	Oryza nivara	52.80	1.00e-82	298.00
IUUC-Opu-083573	Oryza punctata	52.34	7.00e-85	306.00
IUUC-Oru-084631	Oryza rufipogon	52.80	1.00e-82	298.00
IUUC-Osa-086256	Oryza sativa	52.80	1.00e-82	298.00
IUUC-Ppa-095370	Physcomitrella patens	41.88	1.00e-60	226.00
IUUC-Pop-100000	Populus trichocarpa	67.93	4.00e-108	383.00
IUUC-Ppe-101308	Prunus persica	61.83	7.00e-102	362.00
IUUC-Ssl-108600	Sclerotinia sclerotiorum	48.15	2.00e-11	63.90
IUUC-Smo-109096	Selaginella moellendorffii	46.03	2.00e-62	231.00
IUUC-Sit-109993	Setaria italica	56.25	3.00e-88	317.00
IUUC-Sly-111289	Solanum lycopersicum	61.98	5.00e-103	366.00
IUUC-Stu-112307	Solanum tuberosum	62.41	7.00e-91	326.00
IUUC-Sar-113270	Sorex araneus	43.66	1.00e-12	67.80
IUUC-Sbi-114382	Sorghum bicolor	55.17	1.00e-91	329.00
IUUC-Tca-121281	Theobroma cacao	69.52	2.00e-109	388.00
IUUC-Tae-123601	Triticum aestivum	55.96	2.00e-86	311.00
IUUC-Tur-126002	Triticum urartu	50.67	7.00e-52	196.00
IUUC-Vvi-131628	Vitis vinifera	65.07	8.00e-94	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence