iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051567

Ensembl Protein ID

LPERR04G18810.1

UniProt Accession

A0A0D9W8M8; A0A0D9W8M8_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR04G18810	LPERR04G18810.1	LPERR04G18810.1
LPERR04G18810	LPERR04G18810.2	LPERR04G18810.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-22	80.4	497	569

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++flCp++ ++++ Pv++++G+t++r +I +w+++g++ cP+t+q+l++ ++   n +l+rli++w +e++
   Q: 497  IPSDFLCPLTRQIFNRPVTIETGQTFERHAIVQWFDKGNRMCPITGQELESLSIpDINRVLKRLIDNWKSEHG 569
           8************************************************999997779************997 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MAPPPSSLLR DLLAADGFRN RRRKPPDDNP PAAAPRTASM PLQHRRPTRP ARSQSDVLTR 60
SRLRETNASD REEKASTATR KSSASLTSAR SYTIINNNSN SSKAASASST EIPALDESAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCGAACAC TAATGTGCTA GCAGCAGCAG AGACACGTCC CGCCCGGCAA GGCGGCAACA 60
GCAATGGCGC CGCCGCCGTC TTCGTTGCTC CGCGACCTCC TGGCCGCCGA TGGCTTCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	37.52	1.00e-78	287.00
IUUC-Bdi-014999	Brachypodium distachyon	61.99	0.00e+00	692.00
IUUC-Gma-044073	Glycine max	37.37	2.00e-72	267.00
IUUC-Hvu-047722	Hordeum vulgare	62.27	0.00e+00	899.00
IUUC-Mtr-058670	Medicago truncatula	35.08	1.00e-78	288.00
IUUC-Mac-065130	Musa acuminata	41.61	3.00e-82	299.00
IUUC-Oba-075449	Oryza barthii	73.90	0.00e+00	1224.00
IUUC-Obr-076588	Oryza brachyantha	71.31	0.00e+00	1208.00
IUUC-Ogu-078984	Oryza glumaepatula	72.83	0.00e+00	1189.00
IUUC-Olo-080563	Oryza longistaminata	69.83	0.00e+00	826.00
IUUC-Ome-081747	Oryza meridionalis	72.77	0.00e+00	1234.00
IUUC-Oni-082227	Oryza nivara	73.90	0.00e+00	1218.00
IUUC-Opu-083803	Oryza punctata	77.82	0.00e+00	1263.00
IUUC-Oru-084717	Oryza rufipogon	74.00	0.00e+00	1224.00
IUUC-Osa-085390	Oryza sativa	75.47	0.00e+00	932.00
IUUC-Pop-099189	Populus trichocarpa	40.20	2.00e-80	293.00
IUUC-Ppe-101493	Prunus persica	42.08	3.00e-85	309.00
IUUC-Sit-110010	Setaria italica	57.02	1.00e-168	586.00
IUUC-Stu-112239	Solanum tuberosum	38.92	4.00e-88	318.00
IUUC-Sbi-113947	Sorghum bicolor	57.02	0.00e+00	630.00
IUUC-Tca-121435	Theobroma cacao	42.86	8.00e-97	348.00
IUUC-Tae-125513	Triticum aestivum	62.50	0.00e+00	961.00
IUUC-Tur-126526	Triticum urartu	66.17	1.00e-137	482.00
IUUC-Vvi-130964	Vitis vinifera	42.49	2.00e-90	326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence