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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006794
UUCD1 version UUC-ArT-00885
Ensembl Protein ID AT5G42940.2
UniProt Accession Q9FMM4; Q9ZT41; RHG1A_ARATH
Genbank Protein ID BAB09196.1; AED94890.1; ANM68691.1; AAL58938.1; AAO42794.1; BAH57192.1; AAC69857.1
Protein Name Probable E3 ubiquitin-protein ligase RHG1A; RING-H2 finger G1a; RING-H2 zinc finger protein RHG1a; RING-type E3 ubiquitin transferase RHG1A
Genbank Nucleotide ID AB008264; CP002688; CP002688; AF462851; BT004548; AK319077; AF079183
Gene Name RHG1A; At5g42940; MBD2.14
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G42940 AT5G42940.2 AT5G42940.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexPINAMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 5.90e-07 30.8 637 678
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e++   +d   +l CgH fh +C++ w       +++ +CP+C+
   Q: 637  CCVCQEEYtegED-MGTLECGHEFHSQCIKEW------LKQKNLCPICK 678
           ********66544.8899**************......99********6 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro.
 Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro.
Protein Sequence
(Fasta)
MQGERASLGY LSEALNFEHG SSSSNGVIDH WENIHSLGDN DLQDYMIANS ESNTSLANSV 60
YHEQQGLRRF SLGEASSSGT KDEASSHNEQ RMETRCFDGR GNEIIDLDPV FAQPSGTNQP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006794|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAATCTTTA CACATTGAAT TATTAGTTTT TGTTTATTCG TTGATTTAGG CATTTAGCAA 60
TTCAATTCAG TCTTTGGAAA CTGTTCTTAT GACTGACCCT TTTTAACTTT TTGATTCAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006794|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
KEGG ath:AT5G42940
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002953 Amborella trichopoda 52.63 3.00e-38 152.00
IUUC-Aly-005474 Arabidopsis lyrata 91.18 0.00e+00 1162.00
IUUC-Bdi-014368 Brachypodium distachyon 52.33 7.00e-52 197.00
IUUC-Bol-015553 Brassica oleracea 67.05 0.00e+00 738.00
IUUC-Bra-017121 Brassica rapa 64.90 0.00e+00 727.00
IUUC-Mtr-057649 Medicago truncatula 35.64 2.00e-79 290.00
IUUC-Ola-087455 Oryzias latipes 34.62 5.00e-15 76.30
IUUC-Stu-112006 Solanum tuberosum 32.55 4.00e-65 242.00
IUUC-Tca-121625 Theobroma cacao 44.03 1.00e-121 429.00
Created Date 25-Jun-2017

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