iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109319

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377593

Gene Name

SELMODRAFT_104036

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_104036	EFJ23441	EFJ23441

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.80e-07	29.6	127	161
E3 activity/RING/RING	3.50e-15	56.9	119	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 16   rdPvvlpsGitydrssIekwlasggktcPvtrqpl 50
             Pv++p+G+ +  ++++kw+a+g+k+c ++r ++
   Q: 127  DRPVTTPCGHNFCLKCLQKWFAQGQKKCGKCRVSF 161
           57**************************9998776 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C+ ++++ p+++pCgH f+++Clqkw     +++++ +C  Cr
   Q: 119  CVFCQGSLDR-PVTTPCGHNFCLKCLQKW-----FAQGQKKCGKCR 158
           **********.9*****************.....9*******9997 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MELACENGRC LVCKTEPPEQ ETLPCGSCGC VWHLPCLKAP MTLADVSPGW TCPDCSDDPA 60
SNSKKPGPSG GENELLRKIR EINADTSLSD AQKAAQRQML LSNGAVPAGK EDDEDELICV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCTCG CTTGCGAGAA TGGGAGGTGT CTGGTTTGCA AGACGGAGCC GCCGGAGCAA 60
GAAACCCTGC CTTGCGGGAG CTGCGGGTGT GTGTGGCACT TGCCATGCTT GAAGGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_104036

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000242	Aegilops tauschii	59.90	2.00e-133	468.00
IUUC-Aml-001285	Ailuropoda melanoleuca	46.80	4.00e-45	175.00
IUUC-Atr-002603	Amborella trichopoda	54.64	0.00e+00	638.00
IUUC-Aly-006276	Arabidopsis lyrata	54.49	0.00e+00	628.00
IUUC-Ath-006667	Arabidopsis thaliana	54.08	3.00e-178	617.00
IUUC-Ame-010777	Astyanax mexicanus	37.46	6.00e-46	178.00
IUUC-Bci-013703	Botrytis cinerea	31.68	8.00e-11	61.20
IUUC-Bdi-014586	Brachypodium distachyon	54.33	3.00e-171	594.00
IUUC-Bol-015519	Brassica oleracea	55.33	0.00e+00	640.00
IUUC-Bra-017110	Brassica rapa	55.24	0.00e+00	641.00
IUUC-Cja-018864	Callithrix jacchus	46.31	1.00e-45	177.00
IUUC-Cfa-020558	Canis familiaris	46.80	5.00e-45	175.00
IUUC-Cre-022645	Chlamydomonas reinhardtii	35.17	9.00e-81	293.00
IUUC-Cho-024857	Choloepus hoffmanni	40.65	3.00e-21	96.70
IUUC-Dno-029523	Dasypus novemcinctus	46.80	2.00e-45	176.00
IUUC-Ete-032375	Echinops telfairi	36.00	1.00e-07	51.60
IUUC-Eca-033266	Equus caballus	46.77	2.00e-44	173.00
IUUC-Eeu-035077	Erinaceus europaeus	47.06	3.00e-37	148.00
IUUC-Fca-035685	Felis catus	49.46	6.00e-45	175.00
IUUC-Gac-042196	Gasterosteus aculeatus	29.82	2.00e-46	180.00
IUUC-Gma-043488	Glycine max	54.55	4.00e-177	613.00
IUUC-Ggo-045414	Gorilla gorilla	46.31	1.00e-45	177.00
IUUC-Hsa-046236	Homo sapiens	46.31	1.00e-45	177.00
IUUC-Hvu-047471	Hordeum vulgare	58.24	1.00e-152	532.00
IUUC-Lpe-050756	Leersia perrieri	53.90	7.00e-178	616.00
IUUC-Loc-051806	Lepisosteus oculatus	35.13	3.00e-45	176.00
IUUC-Laf-053671	Loxodonta africana	46.31	1.00e-44	174.00
IUUC-Meu-056189	Macropus eugenii	52.07	2.00e-30	127.00
IUUC-Mpo-057318	Magnaporthe poae	34.35	3.00e-09	56.20
IUUC-Mtr-058805	Medicago truncatula	52.38	2.00e-172	598.00
IUUC-Mac-064697	Musa acuminata	51.45	2.00e-173	601.00
IUUC-Mpu-065696	Mustela putorius furo	46.80	6.00e-45	175.00
IUUC-Mlu-067538	Myotis lucifugus	47.26	5.00e-45	175.00
IUUC-Oba-075108	Oryza barthii	54.56	4.00e-178	617.00
IUUC-Obr-076572	Oryza brachyantha	53.14	6.00e-171	593.00
IUUC-Ogl-077177	Oryza glaberrima	54.56	4.00e-178	617.00
IUUC-Ogu-078298	Oryza glumaepatula	54.56	4.00e-178	617.00
IUUC-Oin-079911	Oryza indica	54.56	3.00e-178	617.00
IUUC-Olo-080527	Oryza longistaminata	47.39	7.00e-154	536.00
IUUC-Ome-081137	Oryza meridionalis	52.03	7.00e-165	573.00
IUUC-Oni-082620	Oryza nivara	54.56	3.00e-178	617.00
IUUC-Opu-083974	Oryza punctata	55.10	4.00e-177	614.00
IUUC-Oru-084976	Oryza rufipogon	54.56	4.00e-178	617.00
IUUC-Osa-085339	Oryza sativa	54.56	4.00e-178	617.00
IUUC-Oga-088221	Otolemur garnettii	45.81	1.00e-44	174.00
IUUC-Ptr-090559	Pan troglodytes	46.31	1.00e-45	177.00
IUUC-Pma-094339	Petromyzon marinus	46.05	1.00e-43	171.00
IUUC-Ppa-095940	Physcomitrella patens	50.89	6.00e-174	603.00
IUUC-Pab-098243	Pongo abelii	46.31	1.00e-45	177.00
IUUC-Pop-099561	Populus trichocarpa	54.88	0.00e+00	639.00
IUUC-Pca-100503	Procavia capensis	46.80	5.00e-46	178.00
IUUC-Ppe-101961	Prunus persica	55.34	4.00e-179	620.00
IUUC-Sit-110588	Setaria italica	54.64	2.00e-179	622.00
IUUC-Sly-111415	Solanum lycopersicum	52.58	3.00e-176	611.00
IUUC-Stu-112842	Solanum tuberosum	50.67	2.00e-177	615.00
IUUC-Sbi-114726	Sorghum bicolor	54.16	2.00e-171	595.00
IUUC-Ssc-116081	Sus scrofa	46.31	8.00e-45	174.00
IUUC-Tni-119843	Tetraodon nigroviridis	34.41	1.00e-49	190.00
IUUC-Tca-121614	Theobroma cacao	54.05	2.00e-177	615.00
IUUC-Tae-123299	Triticum aestivum	52.91	7.00e-157	546.00
IUUC-Tme-127149	Tuber melanosporum	46.47	9.00e-26	110.00
IUUC-Vvi-131413	Vitis vinifera	53.08	0.00e+00	642.00
IUUC-Xtr-132771	Xenopus tropicalis	36.98	1.00e-43	171.00
IUUC-Xma-133516	Xiphophorus maculatus	32.75	2.00e-47	183.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence