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Tag Content
iUUCD ID IUUC-Aly-006097
Ensembl Protein ID scaffold_300074.1
UniProt Accession D7L9P7; D7L9P7_ARALL
Genbank Protein ID EFH60538.1
Protein Name Methyl-CpG-binding domain 9
Genbank Nucleotide ID GL348715
Gene Name MBD9; ARALYDRAFT_896104
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_300074.1 scaffold_300074.1 scaffold_300074.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 8.20e-12 45.8 1289 1335
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC+vCg  ++d+ s++ C+ C+  +H  Cl+++     p+ + w+Cp+C 
   Q: 1289 VCKVCGVDKDDD-SVLLCDTCDAEYHTYCLNPP-LIRIPEGN-WYCPSCV 1335
           8*****999977.7*******************.999***96.******6 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MELTDSTTEQ LGDTRTAALN EENRSFLGID LNEIPTGPTL GGGCTGGQED DGEYEPVEVV 60
RSIHDNPDPA PGAPAEVPEP DRDASCAACG RPESMELVVV CDACERGFHL SCVNDGVEAA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006097|E3,PHD|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTCCAATAAC CTAATCGAAT AATGGAACTC ACTGATTCTA CAACCGAGCA ACTCGGAGAC 60
ACTCGGACCG CCGCTCTCAA CGAAGAGAAT CGCTCCTTTC TCGGTATCGA TCTCAACGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006097|E3,PHD|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001487--Bromodomain
IPR016177--DNA-bd_dom
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51543--FYRC
PS51542--FYRN
PS50982--MBD
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF05965--FYRC
PF05964--FYRN
PF01429--MBD
PF00628--PHD
PF15612--WHIM1
PF15613--WSD
SMART

SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0009506--C:plasmodesma
GO:0003677--F:DNA binding
GO:0004402--F:histone acetyltransferase activity
GO:0008270--F:zinc ion binding
GO:0043966--P:histone H3 acetylation
GO:0043967--P:histone H4 acetylation
GO:0048573--P:photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated
GO:0010223--P:secondary shoot formation
KEGG aly:ARALYDRAFT_896104
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000077 Aegilops tauschii 41.64 5.00e-168 585.00
IUUC-Atr-002838 Amborella trichopoda 41.02 0.00e+00 1148.00
IUUC-Ath-007218 Arabidopsis thaliana 91.17 0.00e+00 3745.00
IUUC-Acl-008162 Aspergillus clavatus 48.94 7.00e-13 70.10
IUUC-Afl-008625 Aspergillus flavus 51.06 7.00e-13 70.10
IUUC-Afu-008796 Aspergillus fumigatus 53.19 2.00e-13 71.60
IUUC-Ani-009139 Aspergillus nidulans 51.06 2.00e-13 71.60
IUUC-Aor-010155 Aspergillus oryzae 51.06 6.00e-13 70.10
IUUC-Ate-010453 Aspergillus terreus 46.81 3.00e-12 67.80
IUUC-Ame-010620 Astyanax mexicanus 35.85 3.00e-15 77.80
IUUC-Bta-012902 Bos taurus 54.00 4.00e-13 70.90
IUUC-Bci-013992 Botrytis cinerea 39.58 3.00e-10 61.60
IUUC-Bdi-014742 Brachypodium distachyon 36.21 2.00e-147 515.00
IUUC-Bol-015506 Brassica oleracea 78.07 0.00e+00 3301.00
IUUC-Bra-017998 Brassica rapa 80.66 0.00e+00 3345.00
IUUC-Cre-022637 Chlamydomonas reinhardtii 51.67 3.00e-09 52.40
IUUC-Csa-023575 Chlorocebus sabaeus 54.00 3.00e-13 71.20
IUUC-Cin-025321 Ciona intestinalis 39.19 3.00e-11 64.30
IUUC-Cgl-026613 Colletotrichum gloeosporioides 36.51 7.00e-10 60.10
IUUC-Cne-026801 Cryptococcus neoformans 48.94 2.00e-13 70.90
IUUC-Dre-027707 Danio rerio 33.96 2.00e-14 75.10
IUUC-Dse-031479 Dothistroma septosporum 28.04 2.00e-09 58.90
IUUC-Dme-032021 Drosophila melanogaster 31.48 2.00e-13 72.00
IUUC-Ete-033144 Echinops telfairi 54.00 3.00e-13 71.20
IUUC-Fso-038127 Fusarium solani 39.68 4.00e-11 64.30
IUUC-Gmo-039140 Gadus morhua 56.00 4.00e-14 73.90
IUUC-Ggr-039929 Gaeumannomyces graminis 38.10 2.00e-09 58.90
IUUC-Gac-041825 Gasterosteus aculeatus 58.49 3.00e-15 77.40
IUUC-Gma-042823 Glycine max 44.96 0.00e+00 1565.00
IUUC-Hvu-047583 Hordeum vulgare 33.03 6.00e-130 457.00
IUUC-Lpe-050785 Leersia perrieri 37.17 0.00e+00 1030.00
IUUC-Mpo-057317 Magnaporthe poae 36.51 2.00e-08 55.10
IUUC-Mtr-058285 Medicago truncatula 44.93 0.00e+00 1571.00
IUUC-Mmr-060968 Microcebus murinus 54.00 4.00e-13 70.50
IUUC-Mmu-063614 Mus musculus 54.00 4.00e-13 70.50
IUUC-Mac-065069 Musa acuminata 43.40 0.00e+00 847.00
IUUC-Mpu-066349 Mustela putorius furo 54.00 4.00e-13 70.90
IUUC-Nfi-068430 Neosartorya fischeri 53.19 2.00e-13 71.60
IUUC-Ncr-068763 Neurospora crassa 42.86 2.00e-08 55.50
IUUC-Opr-071002 Ochotona princeps 54.00 3.00e-13 70.90
IUUC-Ocu-074164 Oryctolagus cuniculus 54.00 4.00e-13 70.90
IUUC-Oba-075854 Oryza barthii 38.87 0.00e+00 1139.00
IUUC-Obr-076343 Oryza brachyantha 37.99 0.00e+00 1120.00
IUUC-Ogl-077886 Oryza glaberrima 38.30 1.00e-165 576.00
IUUC-Ogu-078887 Oryza glumaepatula 38.87 0.00e+00 1137.00
IUUC-Olo-080668 Oryza longistaminata 38.82 0.00e+00 1137.00
IUUC-Ome-081800 Oryza meridionalis 38.76 0.00e+00 1137.00
IUUC-Oni-082593 Oryza nivara 38.87 0.00e+00 1137.00
IUUC-Opu-083363 Oryza punctata 38.48 0.00e+00 1123.00
IUUC-Oru-084298 Oryza rufipogon 38.73 0.00e+00 1133.00
IUUC-Osa-085487 Oryza sativa 36.80 1.00e-148 520.00
IUUC-Ola-087076 Oryzias latipes 54.00 5.00e-13 70.10
IUUC-Oga-088350 Otolemur garnettii 54.00 4.00e-13 70.50
IUUC-Oar-090045 Ovis aries 54.00 4.00e-13 70.90
IUUC-Pma-094137 Petromyzon marinus 32.35 1.00e-12 69.30
IUUC-Pno-094879 Phaeosphaeria nodorum 51.22 3.00e-11 64.30
IUUC-Ppa-095893 Physcomitrella patens 38.07 2.00e-97 351.00
IUUC-Ppe-101198 Prunus persica 46.88 0.00e+00 1740.00
IUUC-Pgr-103434 Puccinia graminis 55.10 3.00e-17 82.00
IUUC-Pte-104195 Pyrenophora teres 51.06 7.00e-14 73.20
IUUC-Pyt-104566 Pyrenophora triticirepentis 51.06 6.00e-14 73.20
IUUC-Sce-106207 Saccharomyces cerevisiae 44.23 6.00e-12 65.50
IUUC-Sha-107506 Sarcophilus harrisii 54.00 4.00e-13 70.50
IUUC-Sja-107970 Schizosaccharomyces japonicus 33.33 3.00e-12 67.40
IUUC-Spo-108283 Schizosaccharomyces pombe 55.56 3.00e-13 71.20
IUUC-Ssl-108489 Sclerotinia sclerotiorum 39.58 2.00e-10 61.60
IUUC-Sit-110633 Setaria italica 38.64 0.00e+00 1050.00
IUUC-Sly-111298 Solanum lycopersicum 26.67 2.00e-10 61.60
IUUC-Sar-113052 Sorex araneus 54.00 4.00e-13 70.50
IUUC-Sbi-113926 Sorghum bicolor 51.11 1.00e-12 63.50
IUUC-Tsy-119237 Tarsius syrichta 54.35 1.00e-10 62.80
IUUC-Tca-121595 Theobroma cacao 49.21 0.00e+00 1870.00
IUUC-Tre-122213 Trichoderma reesei 41.27 9.00e-12 66.20
IUUC-Tvi-122263 Trichoderma virens 30.08 2.00e-11 65.50
IUUC-Tae-123821 Triticum aestivum 36.86 0.00e+00 1043.00
IUUC-Tur-126242 Triticum urartu 41.90 7.00e-168 585.00
IUUC-Tme-127087 Tuber melanosporum 43.75 6.00e-10 60.10
IUUC-Uma-129590 Ustilago maydis 43.14 4.00e-11 64.70
IUUC-Vpa-130429 Vicugna pacos 54.00 4.00e-13 70.90
IUUC-Vvi-130929 Vitis vinifera 44.34 0.00e+00 1570.00
IUUC-Zma-135560 Zea mays 37.36 0.00e+00 1050.00
Created Date 25-Jun-2017

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