iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oan-073568

Ensembl Protein ID

ENSOANP00000003977.2

UniProt Accession

F6UHH5; F6UHH5_ORNAN

Protein Name

Uncharacterized protein

Gene Name

KDM5B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOANG00000002512.4	ENSOANT00000003978.3	ENSOANP00000003977.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.00e-19	68.2	316	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vCl+Cg+g++++  l+ C+ C++ +H  Cl ++   ++p+ + w CpkC 
   Q: 316  VCLLCGSGSDED-RLLLCDGCDDSYHTFCLIPP-LHDVPKGD-WRCPKCL 362
           8*********88.6*******************.*******7.******5 PP

Organism

Ornithorhynchus anatinus

Protein Sequence
(Fasta)

PPQDRPPPGP APVAPAAAME PSPLGEFLPP PECPVFEPSW EEFADPFAFI HKIRPIAEQT 60
GICKVRPPSQ PPADWQPPFA CDVDKLHFTP RIQRLNELEA QTRVKLNFLD QIAKFWELQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCCCCAGG ACCGGCCCCC CCCAGGACCG GCCCCCGTCG CCCCCGCTGC GGCCATGGAG 60
CCCTCCCCGG TCCCCCCGGG CCCCCCCGGC CCCTTGGGCG AGTTCCTGCC GCCCCCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0034648--F:histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034647--F:histone demethylase activity (H3-trimethyl-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0060444--P:branching involved in mammary gland duct morphogenesis
GO:0060763--P:mammary duct terminal end bud growth
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0010628--P:positive regulation of gene expression
GO:0033601--P:positive regulation of mammary gland epithelial cell proliferation
GO:0009791--P:post-embryonic development
GO:2000864--P:regulation of estradiol secretion
GO:0007338--P:single fertilization
GO:0061038--P:uterus morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	31.54	8.00e-100	358.00
IUUC-Aml-001963	Ailuropoda melanoleuca	89.91	0.00e+00	2618.00
IUUC-Atr-002595	Amborella trichopoda	33.38	2.00e-116	414.00
IUUC-Apl-003770	Anas platyrhynchos	87.99	0.00e+00	2230.00
IUUC-Aca-004867	Anolis carolinensis	83.60	0.00e+00	2586.00
IUUC-Ath-007218	Arabidopsis thaliana	35.56	2.00e-09	58.90
IUUC-Afu-008796	Aspergillus fumigatus	31.13	1.00e-114	407.00
IUUC-Ani-009139	Aspergillus nidulans	30.93	1.00e-108	387.00
IUUC-Ame-010620	Astyanax mexicanus	63.18	0.00e+00	1938.00
IUUC-Bta-012733	Bos taurus	87.03	0.00e+00	2551.00
IUUC-Bci-013992	Botrytis cinerea	34.48	1.00e-106	381.00
IUUC-Bdi-014050	Brachypodium distachyon	31.27	3.00e-119	423.00
IUUC-Bol-015336	Brassica oleracea	36.45	1.00e-14	75.90
IUUC-Cja-019050	Callithrix jacchus	89.57	0.00e+00	2705.00
IUUC-Cfa-021015	Canis familiaris	89.70	0.00e+00	2607.00
IUUC-Cpo-022340	Cavia porcellus	89.23	0.00e+00	2561.00
IUUC-Csa-023441	Chlorocebus sabaeus	90.25	0.00e+00	2687.00
IUUC-Cho-024823	Choloepus hoffmanni	92.95	0.00e+00	1625.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	30.03	3.00e-108	386.00
IUUC-Cne-026851	Cryptococcus neoformans	29.69	5.00e-113	402.00
IUUC-Dre-027707	Danio rerio	61.54	0.00e+00	1860.00
IUUC-Dno-028978	Dasypus novemcinctus	90.30	0.00e+00	2683.00
IUUC-Dor-030854	Dipodomys ordii	80.42	0.00e+00	1800.00
IUUC-Ete-032760	Echinops telfairi	86.45	0.00e+00	1769.00
IUUC-Eca-034370	Equus caballus	89.91	0.00e+00	2540.00
IUUC-Eeu-035012	Erinaceus europaeus	72.58	0.00e+00	1785.00
IUUC-Fca-035494	Felis catus	90.04	0.00e+00	2613.00
IUUC-Fal-037631	Ficedula albicollis	85.68	0.00e+00	2500.00
IUUC-Gmo-039522	Gadus morhua	59.78	0.00e+00	1763.00
IUUC-Ggr-039929	Gaeumannomyces graminis	31.55	2.00e-102	367.00
IUUC-Gga-040802	Gallus gallus	85.39	0.00e+00	2540.00
IUUC-Gac-041563	Gasterosteus aculeatus	62.64	0.00e+00	1887.00
IUUC-Gma-042675	Glycine max	33.33	5.00e-102	366.00
IUUC-Ggo-044856	Gorilla gorilla	73.41	0.00e+00	2017.00
IUUC-Hsa-045888	Homo sapiens	88.22	0.00e+00	2691.00
IUUC-Hvu-047583	Hordeum vulgare	43.04	7.00e-16	79.00
IUUC-Itr-048297	Ictidomys tridecemlineatus	90.32	0.00e+00	2661.00
IUUC-Lch-050483	Latimeria chalumnae	67.76	0.00e+00	2078.00
IUUC-Lpe-051537	Leersia perrieri	31.42	3.00e-90	327.00
IUUC-Loc-052550	Lepisosteus oculatus	71.33	0.00e+00	2140.00
IUUC-Laf-053761	Loxodonta africana	89.36	0.00e+00	2585.00
IUUC-Mcc-055505	Macaca mulatta	88.29	0.00e+00	2694.00
IUUC-Mor-057198	Magnaporthe oryzae	29.80	5.00e-113	402.00
IUUC-Mpo-057317	Magnaporthe poae	33.78	4.00e-106	379.00
IUUC-Mga-059358	Meleagris gallopavo	84.84	0.00e+00	2498.00
IUUC-Mmr-060863	Microcebus murinus	89.93	0.00e+00	2669.00
IUUC-Mdo-061957	Monodelphis domestica	91.79	0.00e+00	2783.00
IUUC-Mmu-063944	Mus musculus	88.08	0.00e+00	2618.00
IUUC-Mac-065069	Musa acuminata	35.14	3.00e-08	55.10
IUUC-Mpu-066719	Mustela putorius furo	87.94	0.00e+00	2659.00
IUUC-Mlu-067366	Myotis lucifugus	81.88	0.00e+00	2434.00
IUUC-Nle-069256	Nomascus leucogenys	87.36	0.00e+00	2658.00
IUUC-Opr-071002	Ochotona princeps	50.83	0.00e+00	1272.00
IUUC-Ont-071756	Oreochromis niloticus	63.09	0.00e+00	1916.00
IUUC-Ocu-073961	Oryctolagus cuniculus	88.05	0.00e+00	2615.00
IUUC-Oba-075388	Oryza barthii	26.24	2.00e-75	278.00
IUUC-Obr-076296	Oryza brachyantha	39.32	2.00e-87	318.00
IUUC-Ogl-077886	Oryza glaberrima	38.83	1.00e-16	81.60
IUUC-Ogu-079040	Oryza glumaepatula	26.60	9.00e-76	278.00
IUUC-Olo-080668	Oryza longistaminata	38.83	4.00e-16	80.90
IUUC-Ome-081764	Oryza meridionalis	28.59	8.00e-94	338.00
IUUC-Oni-083012	Oryza nivara	26.50	4.00e-75	276.00
IUUC-Opu-083164	Oryza punctata	30.32	2.00e-87	317.00
IUUC-Oru-084630	Oryza rufipogon	26.76	9.00e-75	275.00
IUUC-Osa-085487	Oryza sativa	38.83	1.00e-16	81.60
IUUC-Ola-086448	Oryzias latipes	62.44	0.00e+00	1872.00
IUUC-Oga-088501	Otolemur garnettii	85.94	0.00e+00	2236.00
IUUC-Oar-090162	Ovis aries	86.59	0.00e+00	2535.00
IUUC-Ptr-090816	Pan troglodytes	88.35	0.00e+00	2703.00
IUUC-Pan-092764	Papio anubis	90.38	0.00e+00	2690.00
IUUC-Psi-093918	Pelodiscus sinensis	84.69	0.00e+00	2279.00
IUUC-Pfo-096777	Poecilia formosa	63.67	0.00e+00	1929.00
IUUC-Pab-097854	Pongo abelii	88.43	0.00e+00	2091.00
IUUC-Pca-100241	Procavia capensis	85.16	0.00e+00	1708.00
IUUC-Ppe-101504	Prunus persica	31.99	2.00e-102	367.00
IUUC-Pva-103035	Pteropus vampyrus	82.10	0.00e+00	2137.00
IUUC-Rno-105574	Rattus norvegicus	86.75	0.00e+00	2559.00
IUUC-Sce-106207	Saccharomyces cerevisiae	35.68	1.00e-74	274.00
IUUC-Sit-110534	Setaria italica	32.87	8.00e-100	358.00
IUUC-Sly-111298	Solanum lycopersicum	34.56	3.00e-102	366.00
IUUC-Sar-113477	Sorex araneus	87.23	0.00e+00	2318.00
IUUC-Ssc-116132	Sus scrofa	90.13	0.00e+00	2326.00
IUUC-Tgu-117452	Taeniopygia guttata	86.33	0.00e+00	2501.00
IUUC-Tru-117561	Takifugu rubripes	63.97	0.00e+00	1760.00
IUUC-Tsy-119271	Tarsius syrichta	88.69	0.00e+00	2062.00
IUUC-Tni-119650	Tetraodon nigroviridis	62.34	0.00e+00	1855.00
IUUC-Tae-125894	Triticum aestivum	31.61	1.00e-101	365.00
IUUC-Tur-126632	Triticum urartu	31.54	9.00e-100	358.00
IUUC-Tbe-127890	Tupaia belangeri	83.16	0.00e+00	1440.00
IUUC-Ttr-128546	Tursiops truncatus	86.32	0.00e+00	1930.00
IUUC-Vda-129733	Verticillium dahliae	28.93	7.00e-99	355.00
IUUC-Vpa-130432	Vicugna pacos	86.42	0.00e+00	1518.00
IUUC-Vvi-131071	Vitis vinifera	30.47	3.00e-82	300.00
IUUC-Xtr-132008	Xenopus tropicalis	71.85	0.00e+00	2191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence